PMC Links for GEO Profiles (Select 99505109) - PMC

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Items: 18

Select item 99528811.

Selective Destabilization of Transcripts by mRNA Decapping Regulates Oocyte Maturation and Innate Immunity Gene Expression during Ageing in C. elegans

Fivos Borbolis, Dimitra Ranti, Maria-Despina Papadopoulou, Sofia Dimopoulou, Apostolos Malatras, Ioannis Michalopoulos, Popi Syntichaki

Biology (Basel) 2023 Feb; 12(2): 171. Published online 2023 Jan 21. doi: 10.3390/biology12020171

PMCID:: PMC9952881

Abstract Article PDF–4.1M

Select item 94378482.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 84467933.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311834.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 82630665.

Antagonistic fungal enterotoxins intersect at multiple levels with host innate immune defences

Xing Zhang, Benjamin W. Harding, Dina Aggad, Damien Courtine, Jia-Xuan Chen, Nathalie Pujol, Jonathan J. Ewbank

PLoS Genet. 2021 Jun; 17(6): e1009600. Published online 2021 Jun 24. doi: 10.1371/journal.pgen.1009600

PMCID:: PMC8263066

Abstract Article PDF–5.0M

Select item 79951766.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 74632877.

Signaling by AWC Olfactory Neurons Is Necessary for Caenorhabditis elegans’ Response to Prenol, an Odor Associated with Nematode-Infected Insects

Tiffany Baiocchi, Kyle Anesko, Nathan Mercado, Heenam Park, Kassandra Kin, Brandon Strickhouser-Monzon, Priscila Robles, Christian Bowman, Han Wang, Paul W. Sternberg, Adler R. Dillman

Genetics. 2020 Sep; 216(1): 145–157. Published online 2020 Jul 17. doi: 10.1534/genetics.120.303280

PMCID:: PMC7463287

Abstract Article PDF–1.6M

Select item 72001598.

mRNA decapping is an evolutionarily conserved modulator of neuroendocrine signaling that controls development and ageing

Fivos Borbolis, John Rallis, George Kanatouris, Nikolitsa Kokla, Antonis Karamalegkos, Christina Vasileiou, Katerina M Vakaloglou, George Diallinas, Dimitrios J Stravopodis, Christos G Zervas, Popi Syntichaki

eLife. 2020; 9: e53757. Published online 2020 May 5. doi: 10.7554/eLife.53757

PMCID:: PMC7200159

Abstract Article PDF–2.9M

Select item 71473859.

The mRNA decay factor CAR-1/LSM14 regulates axon regeneration via mitochondrial calcium dynamics

Ngang Heok Tang, Kyung Won Kim, Suhong Xu, Stephen Blazie, Brian A. Yee, Gene W. Yeo, Yishi Jin, Andrew D. Chisholm

Curr Biol. Author manuscript; available in PMC 2021 Mar 9.

Published in final edited form as: Curr Biol. 2020 Mar 9; 30(5): 865–876.e7. Published online 2020 Jan 23. doi: 10.1016/j.cub.2019.12.061

PMCID:: PMC7147385

Abstract Article PDF–2.4M

Select item 621659010.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 537670411.

Neuronal function of the mRNA decapping complex determines survival of Caenorhabditis elegans at high temperature through temporal regulation of heterochronic gene expression

Fivos Borbolis, Christina-Maria Flessa, Fani Roumelioti, George Diallinas, Dimitrios J. Stravopodis, Popi Syntichaki

Open Biol. 2017 Mar; 7(3): 160313. Published online 2017 Mar 1. doi: 10.1098/rsob.160313

PMCID:: PMC5376704

Abstract Article PDF–1.1M

Select item 411149912.

Diverse Functions of mRNA Metabolism Factors in Stress Defense and Aging of Caenorhabditis elegans

Aris Rousakis, Anna Vlanti, Fivos Borbolis, Fani Roumelioti, Marianna Kapetanou, Popi Syntichaki

PLoS One. 2014; 9(7): e103365. Published online 2014 Jul 25. doi: 10.1371/journal.pone.0103365

PMCID:: PMC4111499

Abstract Article PDF–14M

Select item 310207713.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 250013914.

Protection of specific maternal messenger RNAs by the P body protein CGH-1 (Dhh1/RCK) during Caenorhabditis elegans oogenesis

Peter R. Boag, Arzu Atalay, Stacey Robida, Valerie Reinke, T. Keith Blackwell

J Cell Biol. 2008 Aug 11; 182(3): 543–557. doi: 10.1083/jcb.200801183

PMCID:: PMC2500139

Abstract Article PDF–4.3M

Select item 244197815.

C. elegans La-related protein, LARP-1, localizes to germline P bodies and attenuates Ras-MAPK signaling during oogenesis

Keith Nykamp, Myon-Hee Lee, Judith Kimble

RNA. 2008 Jul; 14(7): 1378–1389. doi: 10.1261/rna.1066008

PMCID:: PMC2441978

Abstract Article PDF–785K

Select item 134567116.

CAR-1, a Protein That Localizes with the mRNA Decapping Component DCAP-1, Is Required for Cytokinesis and ER Organization in Caenorhabditis elegans Embryos

Jayne M. Squirrell, Zachary T. Eggers, Nancy Luedke, Bonnie Saari, Andrew Grimson, Gary E. Lyons, Philip Anderson, John G. White

Mol Biol Cell. 2006 Jan; 17(1): 336–344. doi: 10.1091/mbc.E05-09-0874

PMCID:: PMC1345671

Abstract Article PDF–659K

Select item 128942917.

Caenorhabditis elegans Decapping Proteins: Localization and Functional Analysis of Dcp1, Dcp2, and DcpS during Embryogenesis

Sabbi Lall, Fabio Piano, Richard E. Davis

Mol Biol Cell. 2005 Dec; 16(12): 5880–5890. doi: 10.1091/mbc.E05-07-0622

PMCID:: PMC1289429

Abstract Article PDF–241K

Select item 126578818.

Dcp2 Decaps m^2,2,7GpppN-Capped RNAs, and Its Activity Is Sequence and Context Dependent

Leah S. Cohen, Claudette Mikhli, Xinfu Jiao, Megerditch Kiledjian, Glenna Kunkel, Richard E. Davis

Mol Cell Biol. 2005 Oct; 25(20): 8779–8791. doi: 10.1128/MCB.25.20.8779-8791.2005

PMCID:: PMC1265788

Abstract Article PDF–502K

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