PMC Links for GEO Profiles (Select 99527985) - PMC

Select item 93032661.

A novel, essential trans-splicing protein connects the nematode SL1 snRNP to the CBC-ARS2 complex

Rotimi Yemi Fasimoye, Rosie Elizabeth Barker Spencer, Eva Soto-Martin, Peter Eijlers, Haitem Elmassoudi, Sarah Brivio, Carolina Mangana, Viktorija Sabele, Radoslava Rechtorikova, Marius Wenzel, Bernadette Connolly, Jonathan Pettitt, Berndt Müller

Nucleic Acids Res. 2022 Jul 22; 50(13): 7591–7607. Published online 2022 Jun 23. doi: 10.1093/nar/gkac534

PMCID:: PMC9303266

Abstract Article PDF–5.5M

Select item 92522872.

Translational suppression via IFG-1/eIF4G inhibits stress-induced RNA alternative splicing in Caenorhabditis elegans

Samantha C Chomyshen, Hadi Tabarraei, Cheng-Wei Wu

Genetics. 2022 Jul; 221(3): iyac075. Published online 2022 May 10. doi: 10.1093/genetics/iyac075

PMCID:: PMC9252287

Abstract Article PDF–1.8M

Select item 90650843.

Functional identification of microRNA-centered complexes in C. elegans

Shilpa Hebbar, Ganesh Panzade, Ajay A. Vashisht, James A. Wohlschlegel, Isana Veksler-Lublinsky, Anna Y. Zinovyeva

Sci Rep. 2022; 12: 7133. Published online 2022 May 3. doi: 10.1038/s41598-022-10771-2

PMCID:: PMC9065084

Abstract Article PDF–2.2M

Select item 83311834.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 62165906.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 49878087.

Cell size and fat content of dietary-restricted Caenorhabditis elegans are regulated by ATX-2, an mTOR repressor

Daniel Z. Bar, Chayki Charar, Jehudith Dorfman, Tam Yadid, Lionel Tafforeau, Denis L. J. Lafontaine, Yosef Gruenbaum

Proc Natl Acad Sci U S A. 2016 Aug 9; 113(32): E4620–E4629. Published online 2016 Jul 25. doi: 10.1073/pnas.1512156113

PMCID:: PMC4987808

Abstract Article PDF–2.0M

Select item 49426128.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 43810829.

The ribonucleotidyl transferase USIP-1 acts with SART3 to promote U6 snRNA recycling

Stefan Rüegger, Takashi S. Miki, Daniel Hess, Helge Großhans

Nucleic Acids Res. 2015 Mar 31; 43(6): 3344–3357. Published online 2015 Mar 9. doi: 10.1093/nar/gkv196

PMCID:: PMC4381082

Abstract Article PDF–4.8M

Select item 367501110.

RSR-2, the Caenorhabditis elegans Ortholog of Human Spliceosomal Component SRm300/SRRM2, Regulates Development by Influencing the Transcriptional Machinery

Laura Fontrodona, Montserrat Porta-de-la-Riva, Tomás Morán, Wei Niu, Mònica Díaz, David Aristizábal-Corrales, Alberto Villanueva, Simó Schwartz, Jr, Valerie Reinke, Julián Cerón

PLoS Genet. 2013 Jun; 9(6): e1003543. Published online 2013 Jun 6. doi: 10.1371/journal.pgen.1003543

PMCID:: PMC3675011

Abstract Article PDF–3.0M

Select item 333735711.

Sm protein down-regulation leads to defects in nuclear pore complex disassembly and distribution in C. elegans embryos

Daphna Joseph-Strauss, Mátyás Gorjánácz, Rachel Santarella-Mellwig, Ekaterina Voronina, Anjon Audhya, Orna Cohen-Fix

Dev Biol. Author manuscript; available in PMC 2013 May 15.

Published in final edited form as: Dev Biol. 2012 May 15; 365(2): 445–457. Published online 2012 Mar 8. doi: 10.1016/j.ydbio.2012.02.036

PMCID:: PMC3337357

Abstract Article PDF–3.2M

Select item 310207712.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 278742813.

A Genomewide RNAi Screen for Genes That Affect the Stability, Distribution and Function of P Granules in Caenorhabditis elegans

Dustin L. Updike, Susan Strome

Genetics. 2009 Dec; 183(4): 1397–1419. doi: 10.1534/genetics.109.110171

PMCID:: PMC2787428

Abstract Article PDF–6.6M

Select item 259647814.

A protein domain-based interactome network for C. elegans early embryogenesis

Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D. Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A. Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P. Roth, Lilia M. Iakoucheva, A. Keith Dunker, Richard Bonneau, Kristin C. Gunsalus, David E. Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A. Hyman, Marc Vidal

Cell. Author manuscript; available in PMC 2009 Aug 8.

Published in final edited form as: Cell. 2008 Aug 8; 134(3): 534–545. doi: 10.1016/j.cell.2008.07.009

Correction in:: volume 151 on page 1633

PMCID:: PMC2596478

Abstract Article PDF–4.0M

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