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Items: 1 to 20 of 26

1.
Amino acid and protein specificity of protein fatty acylation in C. elegans
Bingsen Zhang, Yan Yu, Bennett W. Fox, Yinong Liu, Venkatesh P. Thirumalaikumar, Aleksandra Skirycz, Hening Lin, Frank C. Schroeder
Proc Natl Acad Sci U S A. 2024 Jan 30; 121(5): e2307515121. Published online 2024 Jan 22. doi: 10.1073/pnas.2307515121
PMCID:
PMC10835129
AbstractArticlePDF–1.4M
2.
Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly
Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan
PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466
PMCID:
PMC10802952
AbstractArticlePDF–2.7M
3.
SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans
Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino
Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755
PMCID:
PMC10617626
AbstractArticle
4.
Lysosomal chloride transporter CLH-6 protects lysosome membrane integrity via cathepsin activation
Qianqian Zhang, Yuan Li, Youli Jian, Meijiao Li, Xiaochen Wang
J Cell Biol. 2023 Jun 5; 222(6): e202210063. Published online 2023 Apr 14. doi: 10.1083/jcb.202210063
PMCID:
PMC10114921
AbstractArticlePDF–9.7M
5.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
6.
Noncanonical necrosis in 2 different cell types in a Caenorhabditis elegans NAD+ salvage pathway mutant
Rifath N Reza, Nicholas D Serra, Ariana C Detwiler, Wendy Hanna-Rose, Matt Crook
G3 (Bethesda) 2022 Apr; 12(4): jkac033. Published online 2022 Feb 10. doi: 10.1093/g3journal/jkac033
PMCID:
PMC8982427
AbstractArticlePDF–1.1M
7.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
8.
Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules
Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus
eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833
PMCID:
PMC8331183
AbstractArticlePDF–8.5M
9.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
10.
Lysosome activity is modulated by multiple longevity pathways and is important for lifespan extension in C. elegans
Yanan Sun, Meijiao Li, Dongfeng Zhao, Xin Li, Chonglin Yang, Xiaochen Wang
eLife. 2020; 9: e55745. Published online 2020 Jun 2. doi: 10.7554/eLife.55745
PMCID:
PMC7274789
AbstractArticlePDF–8.1M
11.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
12.
Execution of Necrotic-Like Cell Death in Caenorhabditis elegans Requires Cathepsin D Activity
Nektarios Tavernarakis, Keli Xu, Monica Driscoll
ScientificWorldJournal. 2001; 1: 139. Published online 2001 Nov 10. doi: 10.1100/tsw.2001.241
PMCID:
PMC6084261
AbstractPDF–33K
13.
A Disease Model of Muscle Necrosis Caused by Aeromonas dhakensis Infection in Caenorhabditis elegans
Po-Lin Chen, Yi-Wei Chen, Chun-Chun Ou, Tzer-Min Lee, Chi-Jung Wu, Wen-Chien Ko, Chang-Shi Chen
Front Microbiol. 2016; 7: 2058. Published online 2017 Jan 4. doi: 10.3389/fmicb.2016.02058
PMCID:
PMC5209350
AbstractArticlePDF–3.9M
14.
Cell size and fat content of dietary-restricted Caenorhabditis elegans are regulated by ATX-2, an mTOR repressor
Daniel Z. Bar, Chayki Charar, Jehudith Dorfman, Tam Yadid, Lionel Tafforeau, Denis L. J. Lafontaine, Yosef Gruenbaum
Proc Natl Acad Sci U S A. 2016 Aug 9; 113(32): E4620–E4629. Published online 2016 Jul 25. doi: 10.1073/pnas.1512156113
PMCID:
PMC4987808
AbstractArticlePDF–2.0M
15.
Trifunctional cross-linker for mapping protein-protein interaction networks and comparing protein conformational states
Dan Tan, Qiang Li, Mei-Jun Zhang, Chao Liu, Chengying Ma, Pan Zhang, Yue-He Ding, Sheng-Bo Fan, Li Tao, Bing Yang, Xiangke Li, Shoucai Ma, Junjie Liu, Boya Feng, Xiaohui Liu, Hong-Wei Wang, Si-Min He, Ning Gao, Keqiong Ye, Meng-Qiu Dong, Xiaoguang Lei
eLife. 2016; 5: e12509. Published online 2016 Mar 8. doi: 10.7554/eLife.12509
PMCID:
PMC4811778
AbstractArticlePDF–16M
16.
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
Anna Y. Zinovyeva, Isana Veksler-Lublinsky, Ajay A. Vashisht, James A. Wohlschlegel, Victor R. Ambros
Proc Natl Acad Sci U S A. 2015 Sep 22; 112(38): E5271–E5280. Published online 2015 Sep 8. doi: 10.1073/pnas.1506576112
PMCID:
PMC4586838
AbstractArticlePDF–1.1M
17.
Autophagy protects C. elegans against necrosis during Pseudomonas aeruginosa infection
Cheng-Gang Zou, Yi-Cheng Ma, Li-Li Dai, Ke-Qin Zhang
Proc Natl Acad Sci U S A. 2014 Aug 26; 111(34): 12480–12485. Published online 2014 Aug 11. doi: 10.1073/pnas.1405032111
PMCID:
PMC4151725
AbstractArticlePDF–1.1M
18.
RNA-binding protein GLD-1/quaking genetically interacts with the mir-35 and the let-7 miRNA pathways in Caenorhabditis elegans
Alper Akay, Ashley Craig, Nicolas Lehrbach, Mark Larance, Ehsan Pourkarimi, Jane E. Wright, Angus Lamond, Eric Miska, Anton Gartner
Open Biol. 2013 Nov; 3(11): 130151. doi: 10.1098/rsob.130151
PMCID:
PMC3843822
AbstractArticlePDF–1.1M
19.
Metabolic Labeling of Caenorhabditis elegans Primary Embryonic Cells with Azido-Sugars as a Tool for Glycoprotein Discovery
Amanda R. Burnham-Marusich, Casey J. Snodgrass, Anna M. Johnson, Conrad M. Kiyoshi, Sarah E. Buzby, Matt R. Gruner, Patricia M. Berninsone
PLoS One. 2012; 7(11): e49020. Published online 2012 Nov 12. doi: 10.1371/journal.pone.0049020
PMCID:
PMC3495777
AbstractArticlePDF–806K
20.
Hepatitis B virus X protein targets the Bcl-2 protein CED-9 to induce intracellular Ca2+ increase and cell death in Caenorhabditis elegans
Xin Geng, Brian L. Harry, Qinghua Zhou, Riley Robert Skeen-Gaar, Xiao Ge, Eui Seung Lee, Shohei Mitani, Ding Xue
Proc Natl Acad Sci U S A. 2012 Nov 6; 109(45): 18465–18470. Published online 2012 Sep 28. doi: 10.1073/pnas.1204652109
PMCID:
PMC3494929
AbstractArticlePDF–852K

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