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Items: 1 to 20 of 39

1.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
2.
trim-21 promotes proteasomal degradation of CED-1 for apoptotic cell clearance in C. elegans
Lei Yuan, Peiyao Li, Huiru Jing, Qian Zheng, Hui Xiao
eLife. 2022; 11: e76436. Published online 2022 Aug 5. doi: 10.7554/eLife.76436
PMCID:
PMC9388098
AbstractArticlePDF–17M
3.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
4.
Glia actively sculpt sensory neurons by controlled phagocytosis to tune animal behavior
Stephan Raiders, Erik Calvin Black, Andrea Bae, Stephen MacFarlane, Mason Klein, Shai Shaham, Aakanksha Singhvi
eLife. 2021; 10: e63532. Published online 2021 Mar 24. doi: 10.7554/eLife.63532
PMCID:
PMC8079151
AbstractArticlePDF–2.6M
5.
Defective apoptotic cell clearance activates innate immune response to protect Caenorhabditis elegans against pathogenic bacteria
Jinlong Wan, Lei Yuan, Huiru Jing, Qian Zheng, Hui Xiao
Virulence. 2021; 12(1): 75–83. Published online 2020 Dec 29. doi: 10.1080/21505594.2020.1857982
PMCID:
PMC7781629
AbstractArticlePDF–2.5M
6.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
7.
Programmed cell clearance: from nematodes to humans
Katharina Klöditz, Yu-Zen Chen, Ding Xue, Bengt Fadeel
Biochem Biophys Res Commun. Author manuscript; available in PMC 2018 Jan 15.
Published in final edited form as: Biochem Biophys Res Commun. 2017 Jan 15; 482(3): 491–497. Published online 2016 Dec 2. doi: 10.1016/j.bbrc.2016.12.005
PMCID:
PMC5476906
AbstractArticlePDF–696K
8.
Developmentally programmed germ cell remodeling by endodermal cell cannibalism
Yusuff Abdu, Chelsea Maniscalco, John M. Heddleston, Teng-Leong Chew, Jeremy Nance
Nat Cell Biol. Author manuscript; available in PMC 2017 May 14.
Published in final edited form as: Nat Cell Biol. 2016 Dec; 18(12): 1302–1310. Published online 2016 Nov 14. doi: 10.1038/ncb3439
PMCID:
PMC5129868
AbstractArticlePDF–1.6M
9.
C. elegans midbodies are released, phagocytosed and undergo LC3-dependent degradation independent of macroautophagy
Gholamreza Fazeli, Michaela Trinkwalder, Linda Irmisch, Ann Marie Wehman
J Cell Sci. 2016 Oct 15; 129(20): 3721–3731. doi: 10.1242/jcs.190223
PMCID:
PMC5087666
AbstractArticle
10.
Small GTPases.
Erik A Lundquist
WormBook. 2006 : 1–18. Published online 2006 Jan 17. doi: 10.1895/wormbook.1.67.1
PMCID:
PMC4781362
AbstractArticle
11.
Programmed cell death.
Barbara Conradt, Ding Xue
WormBook. 2005 : 1–13. Published online 2005 Oct 6. doi: 10.1895/wormbook.1.32.1
PMCID:
PMC4781248
AbstractArticle
12.
Genetic dissection of developmental pathways.
Linda S Huang, Paul W Sternberg
WormBook. 2006 : 1–19. Published online 2006 Jun 14. doi: 10.1895/wormbook.1.88.2
PMCID:
PMC4781082
Article
13.
A lysine-rich motif in the phosphatidylserine receptor PSR-1 mediates recognition and removal of apoptotic cells
Hengwen Yang, Yu-Zen Chen, Yi Zhang, Xiaohui Wang, Xiang Zhao, James I. Godfroy, III, Qian Liang, Man Zhang, Tianying Zhang, Quan Yuan, Mary Ann Royal, Monica Driscoll, Ning-Shao Xia, Hang Yin, Ding Xue
Nat Commun. Author manuscript; available in PMC 2015 Jul 7.
Published in final edited form as: Nat Commun. 2015; 6: 5717. Published online 2015 Jan 7. doi: 10.1038/ncomms6717
PMCID:
PMC4306451
AbstractArticlePDF–1.9M
14.
Caspase-mediated activation of Caenorhabditis elegans CED-8 promotes apoptosis and phosphatidylserine externalisation
Yu-Zen Chen, James Mapes, Eui-Seung Lee, Riley Robert Skeen-Gaar, Ding Xue
Nat Commun. Author manuscript; available in PMC 2014 May 14.
Published in final edited form as: Nat Commun. 2013; 4: 2726. doi: 10.1038/ncomms3726
PMCID:
PMC3939056
AbstractArticlePDF–1.1M
15.
CED-1, CED-7, and TTR-52 act in a pathway to regulate exoplasmic phosphatidylserine expression on apoptotic and phagocytic cells
James Mapes, Yu-Zen Chen, Anna Kim, Shohei Mitani, Byung-Ho Kang, Ding Xue
Curr Biol. Author manuscript; available in PMC 2013 Nov 4.
Published in final edited form as: Curr Biol. 2012 Jul 24; 22(14): 10.1016/j.cub.2012.05.052. Published online 2012 Jun 21. doi: 10.1016/j.cub.2012.05.052
PMCID:
PMC3816170
AbstractArticlePDF–2.7M
16.
A Shift to Organismal Stress Resistance in Programmed Cell Death Mutants
Meredith E. Judy, Ayumi Nakamura, Anne Huang, Harli Grant, Helen McCurdy, Kurt F. Weiberth, Fuying Gao, Giovanni Coppola, Cynthia Kenyon, Aimee W. Kao
PLoS Genet. 2013 Sep; 9(9): e1003714. Published online 2013 Sep 19. doi: 10.1371/journal.pgen.1003714
PMCID:
PMC3778000
AbstractArticlePDF–1.3M
17.
SH3 interactome conserves general function over specific form
Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader
Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9
PMCID:
PMC3658277
AbstractArticlePDF–2.3M
18.
Clathrin and AP2 Are Required for Phagocytic Receptor-Mediated Apoptotic Cell Clearance in Caenorhabditis elegans
Didi Chen, Youli Jian, Xuezhao Liu, Yuanya Zhang, Jingjing Liang, Xiaying Qi, Hongwei Du, Wei Zou, Lianwan Chen, Yongping Chai, Guangshuo Ou, Long Miao, Yingchun Wang, Chonglin Yang
PLoS Genet. 2013 May; 9(5): e1003517. Published online 2013 May 16. doi: 10.1371/journal.pgen.1003517
PMCID:
PMC3656144
AbstractArticlePDF–6.4M
19.
Apoptotic regulators promote cytokinetic midbody degradation in C. elegans
Yongping Chai, Dong Tian, Yihong Yang, Guoxin Feng, Ze Cheng, Wei Li, Guangshuo Ou
J Cell Biol. 2012 Dec 24; 199(7): 1047–1055. doi: 10.1083/jcb.201209050
PMCID:
PMC3529525
AbstractArticlePDF–2.5M
20.
Triggering a Cell Shape Change by Exploiting Pre-Existing Actomyosin Contractions
Minna Roh-Johnson, Gidi Shemer, Christopher D. Higgins, Joseph H. McClellan, Adam D. Werts, U. Serdar Tulu, Liang Gao, Eric Betzig, Daniel P. Kiehart, Bob Goldstein
Science. Author manuscript; available in PMC 2012 Sep 9.
Published in final edited form as: Science. 2012 Mar 9; 335(6073): 1232–1235. Published online 2012 Feb 9. doi: 10.1126/science.1217869
PMCID:
PMC3298882
AbstractArticlePDF–4.6M

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