PMC Links for GEO Profiles (Select 99623005) - PMC

Allison M. Lynch, Yuyun Zhu, Bethany G. Lucas, Jonathan D. Winkelman, Keliya Bai, Sterling C.T. Martin, Samuel Block, Mark M. Slabodnick, Anjon Audhya, Bob Goldstein, Jonathan Pettitt, Margaret L. Gardel, Jeff Hardin

Curr Biol. Author manuscript; available in PMC 2023 Dec 5.

Published in final edited form as: Curr Biol. 2022 Dec 5; 32(23): 5189–5199.e6. Published online 2022 Nov 15. doi: 10.1016/j.cub.2022.10.045

PMCID:: PMC9729467

Abstract Article PDF–2.2M

Select item 95289725.

Imaging Epidermal Cell Rearrangement in the C. elegans embryo

Jeff Hardin, Joel Serre, Ryan King, David Reiner

Methods Mol Biol. Author manuscript; available in PMC 2022 Oct 3.

Published in final edited form as: Methods Mol Biol. 2022; 2438: 345–376. doi: 10.1007/978-1-0716-2035-9_22

PMCID:: PMC9528972

Abstract Article PDF–3.4M

Select item 94378486.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 91696467.

The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans

Diego M. Jofré, Dane K. Hoffman, Ailen S. Cervino, Gabriella M. Hahn, McKenzie Grundy, Sijung Yun, Francis R. G. Amrit, Donna B. Stolz, Luciana F. Godoy, Esteban Salvatore, Fabiana A. Rossi, Arjumand Ghazi, M. Cecilia Cirio, Judith L. Yanowitz, Daniel Hochbaum

Proc Natl Acad Sci U S A. 2022 Apr 12; 119(15): e2109508119. Published online 2022 Apr 8. doi: 10.1073/pnas.2109508119

PMCID:: PMC9169646

Abstract Article PDF–2.0M

Select item 90207168.

A modified TurboID approach identifies tissue-specific centriolar components in C. elegans

Elisabeth Holzer, Cornelia Rumpf-Kienzl, Sebastian Falk, Alexander Dammermann

PLoS Genet. 2022 Apr; 18(4): e1010150. Published online 2022 Apr 20. doi: 10.1371/journal.pgen.1010150

Correction in:: PLoS Genet. 2023 Feb; 19(2): e1010645.

PMCID:: PMC9020716

Abstract Article PDF–2.0M

Select item 86645709.

CeLINC, a fluorescence-based protein–protein interaction assay in Caenorhabditis elegans

Jason R. Kroll, Sanne Remmelzwaal, Mike Boxem

Genetics. 2021 Dec; 219(4): iyab163. Published online 2021 Oct 2. doi: 10.1093/genetics/iyab163

PMCID:: PMC8664570

Abstract Article PDF–3.4M

Select item 859704710.

Multi-tissue patterning drives anterior morphogenesis of the C. elegans embryo

Stephanie Grimbert, Karina Mastronardi, Victoria Richard, Ryan Christensen, Christopher Law, Khashayar Zardoui, David Fay, Alisa Piekny

Dev Biol. Author manuscript; available in PMC 2021 Nov 17.

Published in final edited form as: Dev Biol. 2021 Mar; 471: 49–64. Published online 2020 Dec 10. doi: 10.1016/j.ydbio.2020.12.003

PMCID:: PMC8597047

Abstract Article PDF–4.6M

Select item 844679311.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 833118312.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 814969313.

Subcellular three-dimensional imaging deep through multicellular thick samples by structured illumination microscopy and adaptive optics

Ruizhe Lin, Edward T. Kipreos, Jie Zhu, Chang Hyun Khang, Peter Kner

Nat Commun. 2021; 12: 3148. Published online 2021 May 25. doi: 10.1038/s41467-021-23449-6

PMCID:: PMC8149693

Abstract Article PDF–7.8M

Select item 751118914.

Cellular Expression and Functional Roles of All 26 Neurotransmitter GPCRs in the C. elegans Egg-Laying Circuit

Robert W. Fernandez, Kimberly Wei, Erin Y. Wang, Deimante Mikalauskaite, Andrew Olson, Judy Pepper, Nakeirah Christie, Seongseop Kim, Susanne Weissenborn, Mihail Sarov, Michael R. Koelle

J Neurosci. 2020 Sep 23; 40(39): 7475–7488. doi: 10.1523/JNEUROSCI.1357-20.2020

PMCID:: PMC7511189

Abstract Article PDF–5.1M

Select item 744780315.

DEPS-1 is required for piRNA-dependent silencing and PIWI condensate organisation in Caenorhabditis elegans

Kin Man Suen, Fabian Braukmann, Richard Butler, Dalila Bensaddek, Alper Akay, Chi-Chuan Lin, Dovilė Milonaitytė, Neel Doshi, Alexandra Sapetschnig, Angus Lamond, John Edward Ladbury, Eric Alexander Miska

Nat Commun. 2020; 11: 4242. Published online 2020 Aug 25. doi: 10.1038/s41467-020-18089-1

PMCID:: PMC7447803

Abstract Article PDF–2.3M

Select item 739859116.

Functional importance of an inverted formin C-terminal tail at morphologically dynamic epithelial junctions

Anna Hegsted, SarahBeth Votra, Amylisa M. Christophe, Curtis V. Yingling, Sumana Sundaramurthy, David Pruyne

Cytoskeleton (Hoboken) Author manuscript; available in PMC 2020 Aug 3.

Published in final edited form as: Cytoskeleton (Hoboken). 2019 Apr; 76(4): 322–336. Published online 2019 Jun 27. doi: 10.1002/cm.21547

PMCID:: PMC7398591

Abstract Article PDF–3.0M

Select item 663168317.

Role of PRY-1/Axin in heterochronic miRNA-mediated seam cell development

Avijit Mallick, Ayush Ranawade, Bhagwati P. Gupta

BMC Dev Biol. 2019; 19: 17. Published online 2019 Jul 15. doi: 10.1186/s12861-019-0197-5

PMCID:: PMC6631683

Abstract Article PDF–3.3M

Select item 621659018.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 613707619.

FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells

Ena Kolundzic, Andreas Ofenbauer, Selman I. Bulut, Bora Uyar, Gülkiz Baytek, Anne Sommermeier, Stefanie Seelk, Mei He, Antje Hirsekorn, Dubravka Vucicevic, Altuna Akalin, Sebastian Diecke, Scott A. Lacadie, Baris Tursun

Dev Cell. 2018 Sep 10; 46(5): 611–626.e12. doi: 10.1016/j.devcel.2018.07.006