PMC Links for GEO Profiles (Select 99649263) - PMC

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Items: 18

Select item 106176261.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 100231592.

Large vesicle extrusions from C. elegans neurons are consumed and stimulated by glial-like phagocytosis activity of the neighboring cell

Yu Wang, Meghan Lee Arnold, Anna Joelle Smart, Guoqiang Wang, Rebecca J Androwski, Andres Morera, Ken CQ Nguyen, Peter J Schweinsberg, Ge Bai, Jason Cooper, David H Hall, Monica Driscoll, Barth D Grant

eLife. 2023; 12: e82227. Published online 2023 Mar 2. doi: 10.7554/eLife.82227

PMCID:: PMC10023159

Abstract Article PDF–13M

Select item 99920953.

A BORC-dependent molecular pathway for vesiculation of cell corpse phagolysosomes

Gholamreza Fazeli, Roni Levin-Konigsberg, Michael C. Bassik, Christian Stigloher, Ann M. Wehman

Curr Biol. Author manuscript; available in PMC 2024 Feb 27.

Published in final edited form as: Curr Biol. 2023 Feb 27; 33(4): 607–621.e7. Published online 2023 Jan 17. doi: 10.1016/j.cub.2022.12.041

PMCID:: PMC9992095

Abstract Article PDF–2.5M

Select item 86651014.

Asymmetric organelle positioning during epithelial polarization of C. elegans intestinal cells

James N. Brandt, Laura Voss, Fiona M. Rambo, Katelyn Nicholson, Jackson R. Thein, Lydia Fairchild, Laurence Seabrook, Danielia Lewis, Lali Guevara-Hernandez, Matthew L. White, Luca Sax, Victoria Eichten, Logan Harper, Greg J. Hermann

Dev Biol. Author manuscript; available in PMC 2023 Jan 1.

Published in final edited form as: Dev Biol. 2022 Jan; 481: 75–94. Published online 2021 Sep 29. doi: 10.1016/j.ydbio.2021.09.007

PMCID:: PMC8665101

Abstract Article PDF–5.3M

Select item 83311835.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951766.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 65580987.

Physical parameters describing neuronal cargo transport by kinesin UNC-104

Kumiko Hayashi, Shiori Matsumoto, Miki G. Miyamoto, Shinsuke Niwa

Biophys Rev. 2019 Jun; 11(3): 471–482. Published online 2019 May 21. doi: 10.1007/s12551-019-00548-9

PMCID:: PMC6558098

Abstract Article PDF–4.8M

Select item 62768378.

Distinct functional roles of Vps41-mediated neuroprotection in Alzheimer’s and Parkinson’s disease models of neurodegeneration

Edward F Griffin, Xiaohui Yan, Kim A Caldwell, Guy A Caldwell

Hum Mol Genet. 2018 Dec 15; 27(24): 4176–4193. Published online 2018 Aug 24. doi: 10.1093/hmg/ddy308

PMCID:: PMC6276837

Abstract Article PDF–14M

Select item 62165909.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 569332110.

BORC regulates the axonal transport of synaptic vesicle precursors by activating ARL-8

Shinsuke Niwa, Li Tao, Sharon Y. Lu, Gerald M. Liew, Wei Feng, Maxence V. Nachury, Kang Shen

Curr Biol. Author manuscript; available in PMC 2018 Sep 11.

Published in final edited form as: Curr Biol. 2017 Sep 11; 27(17): 2569–2578.e4. Published online 2017 Aug 17. doi: 10.1016/j.cub.2017.07.013

PMCID:: PMC5693321

Abstract Article PDF–2.3M

Select item 543212311.

Autoinhibition of a neuronal kinesin UNC-104/KIF1A regulates the size and density of synapses

Shinsuke Niwa, David M. Lipton, Manatsu Morikawa, Charles Zhao, Nobutaka Hirokawa, Hang Lu, Kang Shen

Cell Rep. Author manuscript; available in PMC 2017 May 15.

Published in final edited form as: Cell Rep. 2016 Aug 23; 16(8): 2129–2141. Published online 2016 Aug 11. doi: 10.1016/j.celrep.2016.07.043

PMCID:: PMC5432123

Abstract Article PDF–988K

Select item 478136212.

Small GTPases.

Erik A Lundquist

WormBook. 2006 : 1–18. Published online 2006 Jan 17. doi: 10.1895/wormbook.1.67.1

PMCID:: PMC4781362

Abstract Article

Select item 389871713.

The Balance Between Capture and Dissociation of Presynaptic Proteins Controls the Spatial Distribution of Synapses

Ye E. Wu, Lin Huo, Celine I. Maeder, Wei Feng, Kang Shen

Neuron. Author manuscript; available in PMC 2014 Jan 22.

Published in final edited form as: Neuron. 2013 Jun 19; 78(6): 994–1011. Published online 2013 May 30. doi: 10.1016/j.neuron.2013.04.035

PMCID:: PMC3898717

Abstract Article PDF–5.5M

Select item 387775714.

Multiple small RNA pathways regulate the silencing of repeated and foreign genes in C. elegans

Sylvia E.J. Fischer, Qi Pan, Peter C. Breen, Yan Qi, Zhen Shi, Chi Zhang, Gary Ruvkun

Genes Dev. 2013 Dec 15; 27(24): 2678–2695. doi: 10.1101/gad.233254.113

PMCID:: PMC3877757

Abstract Article PDF–2.6M

Select item 365581815.

Arl8/ARL-8 functions in apoptotic cell removal by mediating phagolysosome formation in Caenorhabditis elegans

Ayaka Sasaki, Isei Nakae, Maya Nagasawa, Keisuke Hashimoto, Fumiko Abe, Kota Saito, Masamitsu Fukuyama, Keiko Gengyo-Ando, Shohei Mitani, Toshiaki Katada, Kenji Kontani

Mol Biol Cell. 2013 May 15; 24(10): 1584–1592. doi: 10.1091/mbc.E12-08-0628

PMCID:: PMC3655818

Abstract Article PDF–1.8M

Select item 316854416.

An Arf-like small G protein, ARL-8, promotes the axonal transport of presynaptic cargoes by suppressing vesicle aggregation

Matthew P. Klassen, Ye E. Wu, Celine I. Maeder, Isei Nakae, Juan G. Cueva, Emily K. Lehrman, Minoru Tada, Keiko Gengyo-Ando, George J. Wang, Miriam Goodman, Shohei Mitani, Kenji Kontani, Toshiaki Katada, Kang Shen

Neuron. Author manuscript; available in PMC 2011 Sep 7.

Published in final edited form as: Neuron. 2010 Jun 10; 66(5): 710–723. doi: 10.1016/j.neuron.2010.04.033

PMCID:: PMC3168544

Abstract Article PDF–2.4M

Select item 310207717.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 290367218.

The Arf-like GTPase Arl8 Mediates Delivery of Endocytosed Macromolecules to Lysosomes in Caenorhabditis elegans

Isei Nakae, Tomoko Fujino, Tetsuo Kobayashi, Ayaka Sasaki, Yorifumi Kikko, Masamitsu Fukuyama, Keiko Gengyo-Ando, Shohei Mitani, Kenji Kontani, Toshiaki Katada

Mol Biol Cell. 2010 Jul 15; 21(14): 2434–2442. doi: 10.1091/mbc.E09-12-1010