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Items: 1 to 20 of 23

1.
Amino acid and protein specificity of protein fatty acylation in C. elegans
Bingsen Zhang, Yan Yu, Bennett W. Fox, Yinong Liu, Venkatesh P. Thirumalaikumar, Aleksandra Skirycz, Hening Lin, Frank C. Schroeder
Proc Natl Acad Sci U S A. 2024 Jan 30; 121(5): e2307515121. Published online 2024 Jan 22. doi: 10.1073/pnas.2307515121
PMCID:
PMC10835129
AbstractArticlePDF–1.4M
2.
Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans
Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono
J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343
PMCID:
PMC9437848
AbstractArticlePDF–2.0M
3.
Noncanonical necrosis in 2 different cell types in a Caenorhabditis elegans NAD+ salvage pathway mutant
Rifath N Reza, Nicholas D Serra, Ariana C Detwiler, Wendy Hanna-Rose, Matt Crook
G3 (Bethesda) 2022 Apr; 12(4): jkac033. Published online 2022 Feb 10. doi: 10.1093/g3journal/jkac033
PMCID:
PMC8982427
AbstractArticlePDF–1.1M
4.
Gene regulatory network inference in long-lived C. elegans reveals modular properties that are predictive of novel aging genes
Manusnan Suriyalaksh, Celia Raimondi, Abraham Mains, Anne Segonds-Pichon, Shahzabe Mukhtar, Sharlene Murdoch, Rebeca Aldunate, Felix Krueger, Roger Guimerà, Simon Andrews, Marta Sales-Pardo, Olivia Casanueva
iScience. 2022 Jan 21; 25(1): 103663. Published online 2021 Dec 20. doi: 10.1016/j.isci.2021.103663
PMCID:
PMC8753122
AbstractArticlePDF–4.6M
5.
Variants in ATP6V0A1 cause progressive myoclonus epilepsy and developmental and epileptic encephalopathy
Laura C Bott, Mitra Forouhan, Maria Lieto, Ambre J Sala, Ruth Ellerington, Janel O Johnson, Alfina A Speciale, Chiara Criscuolo, Alessandro Filla, David Chitayat, Ebba Alkhunaizi, Patrick Shannon, Andrea H Nemeth, Italian Undiagnosed Diseases Network , Francesco Angelucci, Wooi Fang Lim, Pasquale Striano, Federico Zara, Ingo Helbig, Mikko Muona, Carolina Courage, Anna-Elina Lehesjoki, Samuel F Berkovic, ATPase Consortium , Kenneth H Fischbeck, Francesco Brancati, Richard I Morimoto, Matthew J A Wood, Carlo Rinaldi
Brain Commun. 2021; 3(4): fcab245. Published online 2021 Oct 18. doi: 10.1093/braincomms/fcab245
PMCID:
PMC8665645
AbstractArticlePDF–1.2M
6.
Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling
Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono
J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094
Correction in:
J Biol Chem. 2022 Jun; 298(6): 102081.
PMCID:
PMC8446793
AbstractArticlePDF–1.6M
7.
EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes
Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili
Nat Methods. Author manuscript; available in PMC 2021 Mar 26.
Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4
PMCID:
PMC7995176
AbstractArticlePDF–1.0M
8.
Lysosome activity is modulated by multiple longevity pathways and is important for lifespan extension in C. elegans
Yanan Sun, Meijiao Li, Dongfeng Zhao, Xin Li, Chonglin Yang, Xiaochen Wang
eLife. 2020; 9: e55745. Published online 2020 Jun 2. doi: 10.7554/eLife.55745
PMCID:
PMC7274789
AbstractArticlePDF–8.1M
9.
The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans
Stefanie Müthel, Bora Uyar, Mei He, Anne Krause, Burcu Vitrinel, Selman Bulut, Djordje Vasiljevic, Iris Marchal, Stefan Kempa, Altuna Akalin, Baris Tursun
Aging Cell. 2019 Dec; 18(6): e13012. Published online 2019 Aug 9. doi: 10.1111/acel.13012
PMCID:
PMC6826145
AbstractArticlePDF–3.0M
10.
SUMO peptidase ULP-4 regulates mitochondrial UPR-mediated innate immunity and lifespan extension
Kaiyu Gao, Yi Li, Shumei Hu, Ying Liu
eLife. 2019; 8: e41792. Published online 2019 Jan 15. doi: 10.7554/eLife.41792
PMCID:
PMC6355198
AbstractArticlePDF–3.6M
11.
OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes
Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye
Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307
PMCID:
PMC6216590
AbstractArticlePDF–1.4M
12.
A Disease Model of Muscle Necrosis Caused by Aeromonas dhakensis Infection in Caenorhabditis elegans
Po-Lin Chen, Yi-Wei Chen, Chun-Chun Ou, Tzer-Min Lee, Chi-Jung Wu, Wen-Chien Ko, Chang-Shi Chen
Front Microbiol. 2016; 7: 2058. Published online 2017 Jan 4. doi: 10.3389/fmicb.2016.02058
PMCID:
PMC5209350
AbstractArticlePDF–3.9M
13.
The RNA-binding protein repertoire of Arabidopsis thaliana
Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring
Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766
PMCID:
PMC4942612
AbstractArticlePDF–1.2M
14.
Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal
Anna Y. Zinovyeva, Isana Veksler-Lublinsky, Ajay A. Vashisht, James A. Wohlschlegel, Victor R. Ambros
Proc Natl Acad Sci U S A. 2015 Sep 22; 112(38): E5271–E5280. Published online 2015 Sep 8. doi: 10.1073/pnas.1506576112
PMCID:
PMC4586838
AbstractArticlePDF–1.1M
15.
SH3 interactome conserves general function over specific form
Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Ailan Guo, Lianet Lopez, Alevtina Pavlenco, Adenrele Akintobi, Yingnan Zhang, Jean-François Rual, Bridget Currell, Somasekar Seshagiri, Tong Hao, Xinping Yang, Yun A Shen, Kourosh Salehi-Ashtiani, Jingjing Li, Aaron T Cheng, Dryden Bouamalay, Adrien Lugari, David E Hill, Mark L Grimes, David G Drubin, Barth D Grant, Marc Vidal, Charles Boone, Sachdev S Sidhu, Gary D Bader
Mol Syst Biol. 2013; 9: 652. Published online 2013 Apr 2. doi: 10.1038/msb.2013.9
PMCID:
PMC3658277
AbstractArticlePDF–2.3M
16.
Hepatitis B virus X protein targets the Bcl-2 protein CED-9 to induce intracellular Ca2+ increase and cell death in Caenorhabditis elegans
Xin Geng, Brian L. Harry, Qinghua Zhou, Riley Robert Skeen-Gaar, Xiao Ge, Eui Seung Lee, Shohei Mitani, Ding Xue
Proc Natl Acad Sci U S A. 2012 Nov 6; 109(45): 18465–18470. Published online 2012 Sep 28. doi: 10.1073/pnas.1204652109
PMCID:
PMC3494929
AbstractArticlePDF–852K
17.
OrthoList: A Compendium of C. elegans Genes with Human Orthologs
Daniel D. Shaye, Iva Greenwald
PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085
Correction in:
PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.
PMCID:
PMC3102077
AbstractArticlePDF–530K
18.
Identification of novel aspartic proteases from Strongyloides ratti and characterisation of their evolutionary relationships, stage-specific expression and molecular structure
Luciane V Mello, Helen O'Meara, Daniel J Rigden, Steve Paterson
BMC Genomics. 2009; 10: 611. Published online 2009 Dec 16. doi: 10.1186/1471-2164-10-611
PMCID:
PMC2805697
AbstractArticlePDF–3.9M
19.
Genome-wide investigation reveals pathogen-specific and shared signatures in the response of Caenorhabditis elegans to infection
Daniel Wong, Daphne Bazopoulou, Nathalie Pujol, Nektarios Tavernarakis, Jonathan J Ewbank
Genome Biol. 2007; 8(9): R194. Published online 2007 Sep 17. doi: 10.1186/gb-2007-8-9-r194
PMCID:
PMC2375032
AbstractArticlePDF–1.8M
20.
An Intracellular Serpin Regulates Necrosis by Inhibiting the Induction and Sequelae of Lysosomal Injury
Cliff J. Luke, Stephen C. Pak, Yuko S. Askew, Terra L. Naviglia, David J. Askew, Shila M. Nobar, Anne C. Vetica, Olivia S. Long, Simon C. Watkins, Donna B. Stolz, Robert J. Barstead, Gary L. Moulder, Dieter Brömme, Gary A. Silverman
Cell. Author manuscript; available in PMC 2008 Sep 21.
Published in final edited form as: Cell. 2007 Sep 21; 130(6): 1108–1119. doi: 10.1016/j.cell.2007.07.013
PMCID:
PMC2128786
AbstractArticlePDF–2.7M

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