PMC Links for GEO Profiles (Select 99679541) - PMC

Select item 109464401.

Sall4 regulates posterior trunk mesoderm development by promoting mesodermal gene expression and repressing neural genes in the mesoderm

Matthew P. Pappas, Hiroko Kawakami, Dylan Corcoran, Katherine Q. Chen, Earl Parker Scott, Julia Wong, Micah D. Gearhart, Ryuichi Nishinakamura, Yasushi Nakagawa, Yasuhiko Kawakami

Development. 2024 Mar 1; 151(5): dev202649. Published online 2024 Mar 4. doi: 10.1242/dev.202649

PMCID:: PMC10946440

Abstract Article

Select item 77245042.

Two-Color In Situ Hybridization of Whole-Mount Mouse Embryos

Kristin K. Biris, Terry P. Yamaguchi

Methods Mol Biol. Author manuscript; available in PMC 2020 Dec 9.

Published in final edited form as: Methods Mol Biol. 2014; 1092: 17–30. doi: 10.1007/978-1-60327-292-6_2

PMCID:: PMC7724504

Abstract Article PDF–485K

Select item 59535443.

Ripply2 recruits proteasome complex for Tbx6 degradation to define segment border during murine somitogenesis

Wei Zhao, Masayuki Oginuma, Rieko Ajima, Makoto Kiso, Akemi Okubo, Yumiko Saga

eLife. 2018; 7: e33068. Published online 2018 May 15. doi: 10.7554/eLife.33068

PMCID:: PMC5953544

Abstract Article PDF–7.8M

Select item 52092644.

Supt20 is Required for Development of the Axial Skeleton

Sunita Warrier, Samer Nuwayhid, Julia A. Sabatino, Kelsey F. Sugrue, Irene E. Zohn

Dev Biol. Author manuscript; available in PMC 2018 Jan 15.

Published in final edited form as: Dev Biol. 2017 Jan 15; 421(2): 245–257. Published online 2016 Nov 25. doi: 10.1016/j.ydbio.2016.11.009

PMCID:: PMC5209264

Abstract Article PDF–1.4M

Select item 36703165.

Dynamic CREB family activity drives segmentation and posterior polarity specification in mammalian somitogenesis

T. Peter Lopez, Chen-Ming Fan

Proc Natl Acad Sci U S A. 2013 May 28; 110(22): E2019–E2027. Published online 2013 May 13. doi: 10.1073/pnas.1222115110

PMCID:: PMC3670316

Abstract Article PDF–1.8M

Select item 36227086.

The Wnt3a/β-catenin target gene Mesogenin1 controls the segmentation clock by activating a Notch signaling program

Ravindra B. Chalamalasetty, William C. Dunty, Jr., Kristin K. Biris, Rieko Ajima, Michelina Iacovino, Arica Beisaw, Lionel Feigenbaum, Deborah L. Chapman, Jeong Kyo Yoon, Michael Kyba, Terry P. Yamaguchi

Nat Commun. Author manuscript; available in PMC 2013 Apr 11.

Published in final edited form as: Nat Commun. 2011 Jul 12; 2: 390. Published online 2011 Jul 12. doi: 10.1038/ncomms1381

PMCID:: PMC3622708

Abstract Article PDF–2.5M

Select item 35415307.

The microRNA-processing enzyme DICER is dispensable for somite segmentation but essential for limb bud positioning

Zhen Zhang, Jason R. O’Rourke, Michael T. McManus, Mark Lewandoski, Brian D. Harfe, Xin Sun

Dev Biol. Author manuscript; available in PMC 2013 Jan 10.

Published in final edited form as: Dev Biol. 2011 Mar 15; 351(2): 254–265. Published online 2011 Jan 20. doi: 10.1016/j.ydbio.2011.01.005

PMCID:: PMC3541530

Abstract Article PDF–5.0M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 3109929.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098010.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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