PMC Links for GEO Profiles (Select 9989293) - PMC

Select item 109176601.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 84236542.

ZBED6 counteracts high-fat diet-induced glucose intolerance by maintaining beta cell area and reducing excess mitochondrial activation

Xuan Wang, Shady Younis, Jing Cen, Yun Wang, Camilla Krizhanovskii, Leif Andersson, Nils Welsh

Diabetologia. 2021; 64(10): 2292–2305. Published online 2021 Jul 22. doi: 10.1007/s00125-021-05517-0

PMCID:: PMC8423654

Abstract Article PDF–1.5M

Select item 83403743.

Comprehensive analysis of lncRNAs involved in skeletal muscle development in ZBED6-knockout Bama pigs

Dandan Wang, Yabin Pu, Yefang Li, Dengke Pan, Shengnan Wang, Wenjie Tian, Yuehui Ma, Lin Jiang

BMC Genomics. 2021; 22: 593. Published online 2021 Aug 4. doi: 10.1186/s12864-021-07881-y

PMCID:: PMC8340374

Abstract Article PDF–2.2M

Select item 58347134.

The ZBED6–IGF2 axis has a major effect on growth of skeletal muscle and internal organs in placental mammals

Shady Younis, Milena Schönke, Julie Massart, Rikke Hjortebjerg, Elisabeth Sundström, Ulla Gustafson, Marie Björnholm, Anna Krook, Jan Frystyk, Juleen R. Zierath, Leif Andersson

Proc Natl Acad Sci U S A. 2018 Feb 27; 115(9): E2048–E2057. Published online 2018 Feb 12. doi: 10.1073/pnas.1719278115

PMCID:: PMC5834713

Abstract Article PDF–1.0M

Select item 51166445.

Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos

Wei Cui, Xiangpeng Dai, Chelsea Marcho, Zhengbin Han, Kun Zhang, Kimberly D. Tremblay, Jesse Mager

Sci Rep. 2016; 6: 37396. Published online 2016 Nov 21. doi: 10.1038/srep37396

PMCID:: PMC5116644

Abstract Article PDF–2.1M

Select item 47074666.

Knock-down of ZBED6 in insulin-producing cells promotes N-cadherin junctions between beta-cells and neural crest stem cells in vitro

Xuan Wang, Beichen Xie, Yu Qi, Ola Wallerman, Svitlana Vasylovska, Leif Andersson, Elena Nickolaevna Kozlova, Nils Welsh

Sci Rep. 2016; 6: 19006. Published online 2016 Jan 11. doi: 10.1038/srep19006

PMCID:: PMC4707466

Abstract Article PDF–3.0M

Select item 39797637.

ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells

Lin Jiang, Ola Wallerman, Shady Younis, Carl-Johan Rubin, Elizabeth R. Gilbert, Elisabeth Sundström, Awaisa Ghazal, Xiaolan Zhang, Li Wang, Tarjei S. Mikkelsen, Göran Andersson, Leif Andersson

PLoS One. 2014; 9(4): e94187. Published online 2014 Apr 8. doi: 10.1371/journal.pone.0094187

PMCID:: PMC3979763

Abstract Article PDF–1.1M

Select item 39725058.

Transcription Factor ZBED6 Mediates IGF2 Gene Expression by Regulating Promoter Activity and DNA Methylation in Myoblasts

Yong-Zhen Huang, Liang-Zhi Zhang, Xin-Sheng Lai, Ming-Xun Li, Yu-Jia Sun, Cong-Jun Li, Xian-Yong Lan, Chu-Zhao Lei, Chun-Lei Zhang, Xin Zhao, Hong Chen

Sci Rep. 2014; 4: 4570. Published online 2014 Apr 2. doi: 10.1038/srep04570

PMCID:: PMC3972505

Abstract Article PDF–1.4M

Select item 37917849.

Transcription factor ZBED6 affects gene expression, proliferation, and cell death in pancreatic beta cells

Xuan Wang, Lin Jiang, Ola Wallerman, Ulla Engström, Adam Ameur, Rajesh Kumar Gupta, Yu Qi, Leif Andersson, Nils Welsh

Proc Natl Acad Sci U S A. 2013 Oct 1; 110(40): 15997–16002. Published online 2013 Sep 16. doi: 10.1073/pnas.1303625110

PMCID:: PMC3791784

Abstract Article PDF–972K

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253411.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 285460612.

A domesticated transposon mediates the effects of a single-nucleotide polymorphism responsible for enhanced muscle growth

Falk Butter, Dennis Kappei, Frank Buchholz, Michiel Vermeulen, Matthias Mann

EMBO Rep. 2010 Apr; 11(4): 305–311. Published online 2010 Feb 5. doi: 10.1038/embor.2010.6

PMCID:: PMC2854606

Abstract Article PDF–918K

Select item 278092613.

ZBED6, a Novel Transcription Factor Derived from a Domesticated DNA Transposon Regulates IGF2 Expression and Muscle Growth

Ellen Markljung, Lin Jiang, Jacob D. Jaffe, Tarjei S. Mikkelsen, Ola Wallerman, Martin Larhammar, Xiaolan Zhang, Li Wang, Veronica Saenz-Vash, Andreas Gnirke, Anders M. Lindroth, Romain Barrés, Jie Yan, Sara Strömberg, Sachinandan De, Fredrik Pontén, Eric S. Lander, Steven A. Carr, Juleen R. Zierath, Klas Kullander, Claes Wadelius, Kerstin Lindblad-Toh, Göran Andersson, Göran Hjälm, Leif Andersson

PLoS Biol. 2009 Dec; 7(12): e1000256. Published online 2009 Dec 15. doi: 10.1371/journal.pbio.1000256

PMCID:: PMC2780926

Abstract Article PDF–3.7M

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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