PMC Links for Nucleotide (Select 14579612) - PMC

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Items: 11

Select item 41548671.

Subtype Classification of Iranian HIV-1 Sequences Registered in the HIV Databases, 2006-2013

Kazem Baesi, Samaneh Moallemi, Molood Farrokhi, Seyed Ahmad Seyed Alinaghi, Hong–Ha M. Truong

PLoS One. 2014; 9(9): e105098. Published online 2014 Sep 4. doi: 10.1371/journal.pone.0105098

PMCID:: PMC4154867

Abstract Article PDF–304K

Select item 34719962.

Characterization of full-length HIV-1 CRF17_BF genomes and comparison to the prototype CRF12_BF strains

Paula C. Aulicino, Manuel Gómez-Carrillo, Gonzalo Bello, Carlos Rocco, Andrea Mangano, Jean Carr, Luisa Sen, Brian Foley

Infect Genet Evol. Author manuscript; available in PMC 2012 Oct 15.

Published in final edited form as: Infect Genet Evol. 2012 Mar; 12(2): 443–447. Published online 2012 Jan 12. doi: 10.1016/j.meegid.2012.01.003

PMCID:: PMC3471996

Abstract Article PDF–701K

Select item 30417903.

T-Cell Immune Responses Against Env from CRF12_BF and Subtype B HIV-1 Show High Clade-Specificity that Can Be Overridden by Multiclade Immunizations

Daniela C. Mónaco, Ana M. Rodríguez, María F. Pascutti, Mauricio Carobene, Juliana Falivene, Alejandro Gómez, Cynthia Maeto, Gabriela Turk, José L. Nájera, Mariano Esteban, M. Magdalena Gherardi

PLoS One. 2011; 6(2): e17185. Published online 2011 Feb 18. doi: 10.1371/journal.pone.0017185

PMCID:: PMC3041790

Abstract Article PDF–2.5M

Select item 29813804.

Identification and Characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx Recombinant Subtypes in Mali, West Africa

Hiromi Imamichi, Ousmane Koita, Djeneba Dabitao, Sounkalo Dao, Mahamadou Ibrah, Dramane Sogoba, Robin L. Dewar, Steve C. Berg, Min-Kang Jiang, Mark Parta, Janice A. Washington, Michael A. Polis, H. Clifford Lane, Anatole Tounkara

AIDS Res Hum Retroviruses. 2009 Jan; 25(1): 45–55. doi: 10.1089/aid.2008.0111

PMCID:: PMC2981380

Abstract Article PDF–304K

Select item 27690745.

HIV-1 Integrase Interaction with U3 and U5 Terminal Sequences in Vitro Defined Using Substrates with Random Sequences

Elena Brin, Jonathan Leis

J Biol Chem. Author manuscript; available in PMC 2009 Oct 28.

Published in final edited form as: J Biol Chem. 2002 May 24; 277(21): 18357–18364. Published online 2002 Mar 15. doi: 10.1074/jbc.M201354200

PMCID:: PMC2769074

Abstract Article PDF–950K

Select item 27162996.

Discovery of novel targets for multi-epitope vaccines: Screening of HIV-1 genomes using association rule mining

Sinu Paul, Helen Piontkivska

Retrovirology. 2009; 6: 62. Published online 2009 Jul 6. doi: 10.1186/1742-4690-6-62

PMCID:: PMC2716299

Abstract Article PDF–996K

Select item 26393467.

StepBrothers: inferring partially shared ancestries among recombinant viral sequences

Erik W. Bloomquist, Karin S. Dorman, Marc A. Suchard

Biostatistics. 2009 Jan; 10(1): 106–120. Published online 2008 Jun 18. doi: 10.1093/biostatistics/kxn019

PMCID:: PMC2639346

Abstract Article PDF–233K

Select item 22589998.

Magnitude, Breadth, and Functional Profile of T-Cell Responses during Human Immunodeficiency Virus Primary Infection with B and BF Viral Variants

Gabriela Turk, María Magdalena Gherardi, Natalia Laufer, Mónica Saracco, Renata Luzzi, Josephine H. Cox, Pedro Cahn, Horacio Salomon

J Virol. 2008 Mar; 82(6): 2853–2866. Published online 2008 Jan 9. doi: 10.1128/JVI.02260-07

PMCID:: PMC2258999

Abstract Article PDF–912K

Select item 14023139.

Higher transactivation activity associated with LTR and Tat elements from HIV-1 BF intersubtype recombinant variants

Gabriela Turk, Mauricio Carobene, Ana Monczor, Andrea Elena Rubio, Manuel Gómez-Carrillo, Horacio Salomón

Retrovirology. 2006; 3: 14. Published online 2006 Feb 16. doi: 10.1186/1742-4690-3-14

PMCID:: PMC1402313

Abstract Article PDF–951K

Select item 124847010.

Use of Sequence Data Generated in the Bayer TruGene Genotyping Assay To Recognize and Characterize Non-Subtype-B Human Immunodeficiency Virus Type 1 Strains

Diane L. Hirigoyen, Charles P. Cartwright

J Clin Microbiol. 2005 Oct; 43(10): 5263–5271. doi: 10.1128/JCM.43.10.5263-5271.2005

PMCID:: PMC1248470

Abstract Article PDF–342K

Select item 42784411.

Performance of the Celera Diagnostics ViroSeq HIV-1 Genotyping System for Sequence-Based Analysis of Diverse Human Immunodeficiency Virus Type 1 Strains

Susan H. Eshleman, John Hackett, Jr., Priscilla Swanson, Shawn P. Cunningham, Birgit Drews, Catherine Brennan, Sushil G. Devare, Léopold Zekeng, Lazare Kaptué, Natalia Marlowe

J Clin Microbiol. 2004 Jun; 42(6): 2711–2717. doi: 10.1128/JCM.42.6.2711-2717.2004