PMC Links for Nucleotide (Select 1732474) - PMC

Tanawan Samleerat, Suzie Thenin, Gonzague Jourdain, Nicole Ngo-Giang-Huong, Alain Moreau, Pranee Leechanachai, Jirapan Ithisuknanth, Karin Pagdi, Pornpun Wannarit, Suraphan Sangsawang, Marc Lallemant, Francis Barin, Martine Braibant

Virology. Author manuscript; available in PMC 2015 Jun 15.

Published in final edited form as: Virology. 2009 May 10; 387(2): 388–394. Published online 2009 Mar 20. doi: 10.1016/j.virol.2009.02.024

PMCID:: PMC4468066

Abstract Article PDF–635K

Select item 44462684.

Development of an HIV-1 Subtype Panel in China: Isolation and Characterization of 30 HIV-1 Primary Strains Circulating in China

Jingwan Han, Siyang Liu, Wei Guo, Zuoyi Bao, Xiaolin Wang, Lin Li, Yongjian Liu, Daomin Zhuang, Hanping Li, Lei Jia, Tao Gui, Hongshuai Sui, Tianyi Li, Jingyun Li

PLoS One. 2015; 10(5): e0127696. Published online 2015 May 27. doi: 10.1371/journal.pone.0127696

PMCID:: PMC4446268

Abstract Article PDF–1.3M

Select item 43247695.

Performance of an In-House Human Immunodeficiency Virus Type 1 Genotyping System for Assessment of Drug Resistance in Cuba

Yoan Alemán, Lore Vinken, Vivian Kourí, Lissette Pérez, Alina Álvarez, Yeissel Abrahantes, Carlos Fonseca, Jorge Pérez, Consuelo Correa, Yudira Soto, Yoeri Schrooten, Anne-Mieke Vandamme, Kristel Van Laethem

PLoS One. 2015; 10(2): e0117176. Published online 2015 Feb 11. doi: 10.1371/journal.pone.0117176

PMCID:: PMC4324769

Abstract Article PDF–223K

Select item 35050426.

Transmitted Antiretroviral Drug Resistance and Thumb Subdomain Polymorphisms Among Newly HIV Type 1 Diagnosed Patients Infected with CRF01_AE and CRF07_BC Virus in Guangdong Province, China

Changfu Yang, Shuyuan Liu, Taisong Zhang, Yaping Hou, Xiaoli Liu, Yun Gao, Guang Yang, Zhen Wang, Huayun Chen, Ming Li, Zhenyu Zhu

AIDS Res Hum Retroviruses. 2012 Dec; 28(12): 1723–1728. doi: 10.1089/aid.2011.0320

PMCID:: PMC3505042

Abstract Article PDF–226K

Select item 34056087.

Continuous Spread of HIV-1 Subtypes D and CRF01_AE in France from 2003 to 2009

Denys Brand, Françoise Cazein, Florence Lot, Sylvie Brunet, Damien Thierry, Alain Moreau, Josiane Pillonel, Caroline Semaille, Francis Barin

J Clin Microbiol. 2012 Jul; 50(7): 2484–2488. doi: 10.1128/JCM.00319-12

PMCID:: PMC3405608

Abstract Article PDF–600K

Select item 29813808.

Identification and Characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx Recombinant Subtypes in Mali, West Africa

Hiromi Imamichi, Ousmane Koita, Djeneba Dabitao, Sounkalo Dao, Mahamadou Ibrah, Dramane Sogoba, Robin L. Dewar, Steve C. Berg, Min-Kang Jiang, Mark Parta, Janice A. Washington, Michael A. Polis, H. Clifford Lane, Anatole Tounkara

AIDS Res Hum Retroviruses. 2009 Jan; 25(1): 45–55. doi: 10.1089/aid.2008.0111

PMCID:: PMC2981380

Abstract Article PDF–304K

Select item 27381969.

Subtype-Specific Differences in the Human Immunodeficiency Virus Type 1 Reverse Transcriptase Connection Subdomain of CRF01_AE Are Associated with Higher Levels of Resistance to 3′-Azido-3′-Deoxythymidine

Krista A. Delviks-Frankenberry, Galina N. Nikolenko, Frank Maldarelli, Saiki Hase, Yutaka Takebe, Vinay K. Pathak

J Virol. 2009 Sep; 83(17): 8502–8513. Published online 2009 Jun 24. doi: 10.1128/JVI.00859-09

PMCID:: PMC2738196

Abstract Article PDF–1.2M

Select item 263094110.

Conserved positive selection signals in gp41 across multiple subtypes and difference in selection signals detectable in gp41 sequences sampled during acute and chronic HIV-1 subtype C infection

Gama P Bandawe, Darren P Martin, Florette Treurnicht, Koleka Mlisana, Salim S Abdool Karim, Carolyn Williamson, The CAPRISA 002 Acute Infection Study Team

Virol J. 2008; 5: 141. Published online 2008 Nov 24. doi: 10.1186/1743-422X-5-141

PMCID:: PMC2630941

Abstract Article PDF–522K

Select item 259735711.

Human Immunodeficiency Virus Type 1 Reverse-Transcriptase and Protease Subtypes: Classification, Amino Acid Mutation Patterns, and Prevalence in a Northern California Clinic-Based Population

Matthew J. Gonzales, Rhoderick N. Machekano, Robert W. Shafer

J Infect Dis. Author manuscript; available in PMC 2008 Dec 8.

Published in final edited form as: J Infect Dis. 2001 Oct 15; 184(8): 998–1006. Published online 2001 Sep 10. doi: 10.1086/323601

PMCID:: PMC2597357

Abstract Article PDF–1.0M

Select item 124847012.

Use of Sequence Data Generated in the Bayer TruGene Genotyping Assay To Recognize and Characterize Non-Subtype-B Human Immunodeficiency Virus Type 1 Strains

Diane L. Hirigoyen, Charles P. Cartwright

J Clin Microbiol. 2005 Oct; 43(10): 5263–5271. doi: 10.1128/JCM.43.10.5263-5271.2005

PMCID:: PMC1248470

Abstract Article PDF–342K

Select item 47848013.

Nucleotide and Amino Acid Polymorphisms at Drug Resistance Sites in Non-B-Subtype Variants of Human Immunodeficiency Virus Type 1

Dan Turner, Bluma Brenner, Daniela Moisi, Mervi Detorio, Raymond Cesaire, Takashi Kurimura, Haruyo Mori, Max Essex, Shlomo Maayan, Mark A. Wainberg

Antimicrob Agents Chemother. 2004 Aug; 48(8): 2993–2998. doi: 10.1128/AAC.48.8.2993-2998.2004

PMCID:: PMC478480

Abstract Article PDF–66K

Select item 42784414.

Performance of the Celera Diagnostics ViroSeq HIV-1 Genotyping System for Sequence-Based Analysis of Diverse Human Immunodeficiency Virus Type 1 Strains

Susan H. Eshleman, John Hackett, Jr., Priscilla Swanson, Shawn P. Cunningham, Birgit Drews, Catherine Brennan, Sushil G. Devare, Léopold Zekeng, Lazare Kaptué, Natalia Marlowe

J Clin Microbiol. 2004 Jun; 42(6): 2711–2717. doi: 10.1128/JCM.42.6.2711-2717.2004

PMCID:: PMC427844

Abstract Article PDF–76K

Select item 13589215.

Human Immunodeficiency Virus Type 1 (HIV-1) Quasispecies at the Sites of Mycobacterium tuberculosis Infection Contribute to Systemic HIV-1 Heterogeneity

Kalonji R. Collins, Miguel E. Quiñones-Mateu, Mianda Wu, Henry Luzze, John L. Johnson, Christina Hirsch, Zahra Toossi, Eric J. Arts

J Virol. 2002 Feb; 76(4): 1697–1706. doi: 10.1128/JVI.76.4.1697-1706.2002

PMCID:: PMC135892

Abstract Article PDF–497K

Select item 12458216.

Conservation of an Intact vif Gene of Human Immunodeficiency Virus Type 1 during Maternal-Fetal Transmission

Venkat R. K. Yedavalli, Colombe Chappey, Erik Matala, Nafees Ahmad

J Virol. 1998 Feb; 72(2): 1092–1102. doi: 10.1128/jvi.72.2.1092-1102.1998

PMCID:: PMC124582

Abstract Article PDF–310K

Select item 11231517.

Simian-Human Immunodeficiency Virus Containing a Human Immunodeficiency Virus Type 1 Subtype-E Envelope Gene: Persistent Infection, CD4⁺ T-Cell Depletion, and Mucosal Membrane Transmission in Macaques

Sunee Himathongkham, Nancy S. Halpin, Jinling Li, Michael W. Stout, Christopher J. Miller, Paul A. Luciw

J Virol. 2000 Sep; 74(17): 7851–7860. doi: 10.1128/jvi.74.17.7851-7860.2000

PMCID:: PMC112315

Abstract Article PDF–150K

Select item 11174018.

Phylogenetic Analyses Indicate an Atypical Nurse-to-Patient Transmission of Human Immunodeficiency Virus Type 1

Christophe P. Goujon, Véronique M. Schneider, Jaouad Grofti, Joëlle Montigny, Vincent Jeantils, Pascal Astagneau, Willy Rozenbaum, Florence Lot, Claudie Frocrain-Herchkovitch, Nathalie Delphin, Frédéric Le Gal, Jean-Claude Nicolas, Michel C. Milinkovitch, Paul Dény

J Virol. 2000 Mar; 74(6): 2525–2532. doi: 10.1128/jvi.74.6.2525-2532.2000

PMCID:: PMC111740

Abstract Article PDF–126K

Select item 11095019.

Testing the Hypothesis of a Recombinant Origin of Human Immunodeficiency Virus Type 1 Subtype E

Jon P. Anderson, Allen G. Rodrigo, Gerald H. Learn, Anup Madan, Claire Delahunty, Michael Coon, Marc Girard, Saladin Osmanov, Leroy Hood, James I. Mullins

J Virol. 2000 Nov; 74(22): 10752–10765. doi: 10.1128/jvi.74.22.10752-10765.2000

PMCID:: PMC110950

Abstract Article PDF–2.0M

Select item 11023720.

A Comprehensive Panel of Near-Full-Length Clones and Reference Sequences for Non-Subtype B Isolates of Human Immunodeficiency Virus Type 1

Feng Gao, David L. Robertson, Catherine D. Carruthers, Sandra G. Morrison, Bixi Jian, Yalu Chen, Françoise Barré-Sinoussi, Marc Girard, Alagarsamy Srinivasan, Alash’le G. Abimiku, George M. Shaw, Paul M. Sharp, Beatrice H. Hahn

J Virol. 1998 Jul; 72(7): 5680–5698. doi: 10.1128/jvi.72.7.5680-5698.1998

PMCID:: PMC110237

Abstract Article PDF–1.7M

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