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Items: 1 to 20 of 21

1.
Comparative Genomic Analysis of a Novel Strain of Taiwan Hot-Spring Cyanobacterium Thermosynechococcus sp. CL-1
Yen-I Cheng, Lin Chou, Yi-Fang Chiu, Hsin-Ta Hsueh, Chih-Horng Kuo, Hsiu-An Chu
Front Microbiol. 2020; 11: 82. Published online 2020 Jan 31. doi: 10.3389/fmicb.2020.00082
PMCID:
PMC7005997
AbstractArticlePDF–5.4M
2.
Species-specific transcriptomic network inference of interspecies interactions
Ryan S. McClure, Christopher C. Overall, Eric A. Hill, Hyun-Seob Song, Moiz Charania, Hans C. Bernstein, Jason E. McDermott, Alexander S. Beliaev
ISME J. 2018 Aug; 12(8): 2011–2023. Published online 2018 May 24. doi: 10.1038/s41396-018-0145-6
PMCID:
PMC6052077
AbstractArticlePDF–2.1M
3.
Codon usage analysis of photolyase encoding genes of cyanobacteria inhabiting diverse habitats
Rajneesh, Jainendra Pathak, Vinod K. Kannaujiya, Shailendra P. Singh, Rajeshwar P. Sinha
3 Biotech. 2017 Jul; 7(3): 192. Published online 2017 Jun 29. doi: 10.1007/s13205-017-0826-2
PMCID:
PMC5491442
AbstractArticlePDF–1.7M
4.
Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership
Hans C. Bernstein, Ryan S. McClure, Vera Thiel, Natalie C. Sadler, Young-Mo Kim, William B. Chrisler, Eric A. Hill, Donald A. Bryant, Margaret F. Romine, Janet K. Jansson, Jim K. Fredrickson, Alexander S. Beliaev
mSystems. 2017 Mar-Apr; 2(2): e00181-16. Published online 2017 Mar 7. doi: 10.1128/mSystems.00181-16
PMCID:
PMC5340862
AbstractArticlePDF–2.7M
5.
Structure and Mechanism of the Phycobiliprotein Lyase CpcT
Wei Zhou, Wen-Long Ding, Xiao-Li Zeng, Liang-Liang Dong, Bin Zhao, Ming Zhou, Hugo Scheer, Kai-Hong Zhao, Xiaojing Yang
J Biol Chem. 2014 Sep 26; 289(39): 26677–26689. Published online 2014 Jul 29. doi: 10.1074/jbc.M114.586743
PMCID:
PMC4175310
AbstractArticlePDF–2.9M
6.
Elucidation of Insertion Elements Carried on Plasmids and In Vitro Construction of Shuttle Vectors from the Toxic Cyanobacterium Planktothrix
Guntram Christiansen, Alexander Goesmann, Rainer Kurmayer
Appl Environ Microbiol. 2014 Aug; 80(16): 4887–4897. doi: 10.1128/AEM.01188-14
PMCID:
PMC4135779
AbstractArticlePDF–1.1M
7.
Recent Advances in the Identification of Replication Origins Based on the Z-curve Method
Feng Gao
Curr Genomics. 2014 Apr; 15(2): 104–112. Published online 2014 Apr. doi: 10.2174/1389202915999140328162938
PMCID:
PMC4009838
AbstractArticlePDF–1003K
8.
Extreme Conservation and Non-Neutral Evolution of the cpmA Circadian Locus in a Globally Distributed Chroococcidiopsis sp. from Naturally Stressful Habitats
Volodymyr Dvornyk, Akhee Sabiha Jahan
Mol Biol Evol. 2012 Dec; 29(12): 3899–3907. Published online 2012 Jul 25. doi: 10.1093/molbev/mss191
PMCID:
PMC3697812
AbstractArticlePDF–203K
9.
Abundant Oligonucleotides Common to Most Bacteria
Colin F. Davenport, Burkhard Tümmler
PLoS One. 2010; 5(3): e9841. Published online 2010 Mar 23. doi: 10.1371/journal.pone.0009841
PMCID:
PMC2843746
AbstractArticlePDF–438K
10.
A unifying framework for seed sensitivity and its application to subset seeds
Gregory Kucherov, Laurent Noé, Mihkail Roytberg
J Bioinform Comput Biol. Author manuscript; available in PMC 2010 Feb 18.
Published in final edited form as: J Bioinform Comput Biol. 2006 Apr; 4(2): 553–569. doi: 10.1142/S0219720006001977
PMCID:
PMC2824148
AbstractArticle
11.
Signature proteins for the major clades of Cyanobacteria
Radhey S Gupta, Divya W Mathews
BMC Evol Biol. 2010; 10: 24. Published online 2010 Jan 25. doi: 10.1186/1471-2148-10-24
PMCID:
PMC2823733
AbstractArticlePDF–4.1M
12.
The Smallest Known Genomes of Multicellular and Toxic Cyanobacteria: Comparison, Minimal Gene Sets for Linked Traits and the Evolutionary Implications
Karina Stucken, Uwe John, Allan Cembella, Alejandro A. Murillo, Katia Soto-Liebe, Juan J. Fuentes-Valdés, Maik Friedel, Alvaro M. Plominsky, Mónica Vásquez, Gernot Glöckner
PLoS One. 2010; 5(2): e9235. Published online 2010 Feb 16. doi: 10.1371/journal.pone.0009235
PMCID:
PMC2821919
AbstractArticlePDF–906K
13.
Biocomputational prediction of non-coding RNAs in model cyanobacteria
Björn Voß, Jens Georg, Verena Schön, Susanne Ude, Wolfgang R Hess
BMC Genomics. 2009; 10: 123. Published online 2009 Mar 23. doi: 10.1186/1471-2164-10-123
PMCID:
PMC2662882
AbstractArticlePDF–969K
14.
Bioinformatic evaluation of L-arginine catabolic pathways in 24 cyanobacteria and transcriptional analysis of genes encoding enzymes of L-arginine catabolism in the cyanobacterium Synechocystis sp. PCC 6803
Sarah Schriek, Christian Rückert, Dorothee Staiger, Elfriede K Pistorius, Klaus-Peter Michel
BMC Genomics. 2007; 8: 437. Published online 2007 Nov 28. doi: 10.1186/1471-2164-8-437
PMCID:
PMC2242806
AbstractArticlePDF–1.8M
15.
A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria
Björn Voß, Gregor Gierga, Ilka M Axmann, Wolfgang R Hess
BMC Genomics. 2007; 8: 375. Published online 2007 Oct 17. doi: 10.1186/1471-2164-8-375
PMCID:
PMC2190773
AbstractArticlePDF–872K
16.
Novel class of glutathione transferases from cyanobacteria exhibit high catalytic activities towards naturally occurring isothiocyanates
Eric Wiktelius, Gun Stenberg
Biochem J. 2007 Aug 15; 406(Pt 1): 115–123. Prepublished online 2007 May 8. Published online 2007 Jul 26. doi: 10.1042/BJ20070328
PMCID:
PMC1948994
AbstractArticlePDF–697K
17.
In search of RNase P RNA from microbial genomes
YONG LI, SIDNEY ALTMAN
RNA. 2004 Oct; 10(10): 1533–1540. doi: 10.1261/rna.7970404
PMCID:
PMC1370640
AbstractArticlePDF–136K
18.
A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land
Fabia U Battistuzzi, Andreia Feijao, S Blair Hedges
BMC Evol Biol. 2004; 4: 44. Published online 2004 Nov 9. doi: 10.1186/1471-2148-4-44
PMCID:
PMC533871
AbstractArticlePDF–593K
19.
cpnDB: A Chaperonin Sequence Database
Janet E. Hill, Susanne L. Penny, Kenneth G. Crowell, Swee Han Goh, Sean M. Hemmingsen
Genome Res. 2004 Aug; 14(8): 1669–1675. doi: 10.1101/gr.2649204
PMCID:
PMC509277
AbstractArticlePDF–266K
20.
Comparative genomics of gene-family size in closely related bacteria
Ravindra Pushker, Alex Mira, Francisco Rodríguez-Valera
Genome Biol. 2004; 5(4): R27. Published online 2004 Mar 18. doi: 10.1186/gb-2004-5-4-r27
PMCID:
PMC395786
AbstractArticlePDF–1.1M

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