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Select item 1102371.

A Comprehensive Panel of Near-Full-Length Clones and Reference Sequences for Non-Subtype B Isolates of Human Immunodeficiency Virus Type 1

Feng Gao, David L. Robertson, Catherine D. Carruthers, Sandra G. Morrison, Bixi Jian, Yalu Chen, Françoise Barré-Sinoussi, Marc Girard, Alagarsamy Srinivasan, Alash’le G. Abimiku, George M. Shaw, Paul M. Sharp, Beatrice H. Hahn

J Virol. 1998 Jul; 72(7): 5680–5698. doi: 10.1128/jvi.72.7.5680-5698.1998

PMCID:: PMC110237

Abstract Article PDF–1.7M

Select item 70049822.

A cross-sectional study to characterize local HIV-1 dynamics in Washington, DC using next-generation sequencing

Keylie M. Gibson, Kamwing Jair, Amanda D. Castel, Matthew L. Bendall, Brittany Wilbourn, Jeanne A. Jordan, Keith A. Crandall, Marcos Pérez-Losada, the DC Cohort Executive Committee

Sci Rep. 2020; 10: 1989. Published online 2020 Feb 6. doi: 10.1038/s41598-020-58410-y

Correction in:: Sci Rep. 2020; 10: 7099.

PMCID:: PMC7004982

Abstract Article PDF–1.6M

Select item 65809663.

Comparisons of Human Immunodeficiency Virus Type 1 Envelope Variants in Blood and Genital Fluids near the Time of Male-to-Female Transmission

Corey A. Williams-Wietzikoski, Mary S. Campbell, Rachel Payant, Airin Lam, Hong Zhao, Hannah Huang, Anna Wald, Wendy Stevens, Glenda Gray, Carey Farquhar, Helen Rees, Connie Celum, James I. Mullins, Jairam R. Lingappa, Lisa M. Frenkel

J Virol. 2019 Jul 1; 93(13): e01769-18. Prepublished online 2019 Apr 17. Published online 2019 Jun 14. doi: 10.1128/JVI.01769-18

PMCID:: PMC6580966

Abstract Article PDF–1.1M

Select item 48904714.

Short-term treatment outcomes in human immunodeficiency virus type-1 and hepatitis B virus co-infections

Kwamena William Coleman Sagoe, Kwabena Obeng Duedu, Francesca Ziga, Afrakoma Adjoa Agyei, Theophilus Korku Adiku, Margaret Lartey, Julius Abraham Addo Mingle, Max Arens

Ann Clin Microbiol Antimicrob. 2016; 15: 38. Published online 2016 Jun 2. doi: 10.1186/s12941-016-0152-2

PMCID:: PMC4890471

Abstract Article PDF–809K

Select item 45528235.

Comparison of HIV-1 nef and gag Variations and Host HLA Characteristics as Determinants of Disease Progression among HIV-1 Vertically Infected Kenyan Children

Matilda Chelimo Saina, Xiuqiong Bi, Raphael Lihana, Raphael Lwembe, Azumi Ishizaki, Annie Panikulam, Tresa Palakudy, Rachel Musoke, Mary Owens, Elijah Maritim Songok, Hiroshi Ichimura

PLoS One. 2015; 10(8): e0137140. Published online 2015 Aug 28. doi: 10.1371/journal.pone.0137140

PMCID:: PMC4552823

Abstract Article PDF–367K

Select item 45435846.

The Number and Complexity of Pure and Recombinant HIV-1 Strains Observed within Incident Infections during the HIV and Malaria Cohort Study Conducted in Kericho, Kenya, from 2003 to 2006

Erik Billings, Eric Sanders-Buell, Meera Bose, Andrea Bradfield, Esther Lei, Gustavo H. Kijak, Miguel A. Arroyo, Rukia M. Kibaya, Paul T. Scott, Monique K. Wasunna, Frederick K. Sawe, Douglas N. Shaffer, Deborah L. Birx, Francine E. McCutchan, Nelson L. Michael, Merlin L. Robb, Jerome H. Kim, Sodsai Tovanabutra

PLoS One. 2015; 10(8): e0135124. Published online 2015 Aug 19. doi: 10.1371/journal.pone.0135124

PMCID:: PMC4543584

Abstract Article PDF–3.3M

Select item 41548677.

Subtype Classification of Iranian HIV-1 Sequences Registered in the HIV Databases, 2006-2013

Kazem Baesi, Samaneh Moallemi, Molood Farrokhi, Seyed Ahmad Seyed Alinaghi, Hong–Ha M. Truong

PLoS One. 2014; 9(9): e105098. Published online 2014 Sep 4. doi: 10.1371/journal.pone.0105098

PMCID:: PMC4154867

Abstract Article PDF–304K

Select item 41359448.

Association between Latent Proviral Characteristics and Immune Activation in Antiretrovirus-Treated Human Immunodeficiency Virus Type 1-Infected Adults

Emily C. Liang, Lindsay Sceats, Nicholas L. Bayless, Dara M. Strauss-Albee, Jessica Kubo, Philip M. Grant, David Furman, Manisha Desai, David A. Katzenstein, Mark M. Davis, Andrew R. Zolopa, Catherine A. Blish

J Virol. 2014 Aug; 88(15): 8629–8639. doi: 10.1128/JVI.01257-14

PMCID:: PMC4135944

Abstract Article PDF–1.5M

Select item 41215209.

A Conserved Target Site in HIV-1 Gag RNA is Accessible to Inhibition by Both an HDV Ribozyme and a Short Hairpin RNA

Robert J Scarborough, Michel V Lévesque, Etienne Boudrias-Dalle, Ian C Chute, Sylvanne M Daniels, Rodney J Ouellette, Jean-Pierre Perreault, Anne Gatignol

Mol Ther Nucleic Acids. 2014 Jul; 3(7): e178. Published online 2014 Jul 29. doi: 10.1038/mtna.2014.31

PMCID:: PMC4121520

Abstract Article PDF–1.2M

Select item 393894710.

Short Communication: Molecular Epidemiology of HIV Type 1 Infection in Northern Greece (2009–2010): Evidence of a Transmission Cluster of HIV Type 1 Subtype A1 Drug-Resistant Strains Among Men Who Have Sex with Men

Zoi-Anna Antoniadou, Ioanna Kousiappa, Lemonia Skoura, Dimitris Pilalas, Simeon Metallidis, Pavlos Nicolaidis, Nicolaos Malisiovas, Leondios G. Kostrikis

AIDS Res Hum Retroviruses. 2014 Mar 1; 30(3): 225–232. doi: 10.1089/aid.2013.0166

PMCID:: PMC3938947

Abstract Article PDF–198K

Select item 393893111.

Prevalence of Drug Resistance in Human Immunodeficiency Virus Type 1-Infected Treatment-Naive Children in Pune, India

Mukesh Kumar, Sourav Sen, Rakesh K. Gupta, Devidas Chaturbhuj, Srikanth P. Tripathy, Ramesh S. Paranjape

AIDS Res Hum Retroviruses. 2014 Mar 1; 30(3): 294–298. doi: 10.1089/aid.2013.0222

PMCID:: PMC3938931

Abstract Article PDF–226K

Select item 393143312.

Use of Principal Components Analysis and Protein Microarray to Explore the Association of HIV-1-Specific IgG Responses with Disease Progression

Helen L. Gerns Storey, Barbra A. Richardson, Benson Singa, Jackie Naulikha, Vivian C. Prindle, Vladimir E. Diaz-Ochoa, Phil L. Felgner, David Camerini, Helen Horton, Grace John-Stewart, Judd L. Walson

AIDS Res Hum Retroviruses. 2014 Jan 1; 30(1): 37–44. doi: 10.1089/aid.2013.0088

PMCID:: PMC3931433

Abstract Article PDF–616K

Select item 390609013.

HIV-1 Genetic Characteristics and Transmitted Drug Resistance among Men Who Have Sex with Men in Kunming, China

Min Chen, Yanling Ma, Yingzhen Su, Li Yang, Renzhong Zhang, Chaojun Yang, Huichao Chen, Wenyun Yan, Yuhua Shi, Lijuan Dong, Ling Chen, Manhong Jia, Lin Lu

PLoS One. 2014; 9(1): e87033. Published online 2014 Jan 29. doi: 10.1371/journal.pone.0087033

PMCID:: PMC3906090

Abstract Article PDF–2.2M

Select item 377898714.

Molecular typing of the recently expanding subtype B HIV-1 epidemic in Romania: Evidence for local spread among MSMs in Bucharest area

Simona Paraschiv, Dan Otelea, Ionelia Batan, Cristian Baicus, Gkikas Magiorkinis, Dimitrios Paraskevis

Infect Genet Evol. 2012 Jul; 12(5): 1052–1057. doi: 10.1016/j.meegid.2012.03.003

PMCID:: PMC3778987

Abstract Article PDF–439K

Select item 352335215.

Prediction of R5, X4, and R5X4 HIV-1 Coreceptor Usage with Evolved Neural Networks

Susanna L. Lamers, Marco Salemi, Michael S. McGrath, Gary B. Fogel

IEEE/ACM Trans Comput Biol Bioinform. Author manuscript; available in PMC 2012 Dec 17.

Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2008 Apr-Jun; 5(2): 291–300. doi: 10.1109/TCBB.2007.1074

PMCID:: PMC3523352

Abstract Article PDF–938K

Select item 340560816.

Continuous Spread of HIV-1 Subtypes D and CRF01_AE in France from 2003 to 2009

Denys Brand, Françoise Cazein, Florence Lot, Sylvie Brunet, Damien Thierry, Alain Moreau, Josiane Pillonel, Caroline Semaille, Francis Barin

J Clin Microbiol. 2012 Jul; 50(7): 2484–2488. doi: 10.1128/JCM.00319-12

PMCID:: PMC3405608

Abstract Article PDF–600K

Select item 330892517.

HIV-1 Subtype distribution in morocco based on national sentinel surveillance data 2004-2005

Mohammed Akrim, Sanae Lemrabet, Elmir Elharti, Rebecca R Gray, Jean Claude Tardy, Robert L Cook, Marco Salemi, Patrice Andre, Taj Azarian, Rajae El Aouad

AIDS Res Ther. 2012; 9: 5. Published online 2012 Feb 14. doi: 10.1186/1742-6405-9-5