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Items: 1 to 20 of 32

1.
Experimental Adaptive Evolution of Simian Immunodeficiency Virus SIVcpz to Pandemic Human Immunodeficiency Virus Type 1 by Using a Humanized Mouse Model
Kei Sato, Naoko Misawa, Junko S. Takeuchi, Tomoko Kobayashi, Taisuke Izumi, Hirofumi Aso, Shumpei Nagaoka, Keisuke Yamamoto, Izumi Kimura, Yoriyuki Konno, Yusuke Nakano, Yoshio Koyanagi
J Virol. 2018 Feb 15; 92(4): e01905-17. Prepublished online 2017 Dec 6. Published online 2018 Jan 30. doi: 10.1128/JVI.01905-17
PMCID:
PMC5790958
AbstractArticlePDF–3.2M
2.
Resistance of Major Histocompatibility Complex Class B (MHC-B) to Nef-Mediated Downregulation Relative to that of MHC-A Is Conserved among Primate Lentiviruses and Influences Antiviral T Cell Responses in HIV-1-Infected Individuals
Francis Mwimanzi, Mako Toyoda, Macdonald Mahiti, Jaclyn K. Mann, Jeffrey N. Martin, David Bangsberg, Mark A. Brockman, Philip Goulder, Frank Kirchhoff, Zabrina L. Brumme, Thumbi Ndung'u, Takamasa Ueno
J Virol. 2018 Jan 1; 92(1): e01409-17. Prepublished online 2017 Oct 18. Published online 2017 Dec 14. doi: 10.1128/JVI.01409-17
PMCID:
PMC5730772
AbstractArticlePDF–2.9M
3.
Molecular evolution of HIV-1 integrase during the 20 years prior to the first approval of integrase inhibitors
Karolin Meixenberger, Kaveh Pouran Yousef, Maureen Rebecca Smith, Sybille Somogyi, Stefan Fiedler, Barbara Bartmeyer, Osamah Hamouda, Norbert Bannert, Max von Kleist, Claudia Kücherer
Virol J. 2017; 14: 223. Published online 2017 Nov 14. doi: 10.1186/s12985-017-0887-1
PMCID:
PMC5686839
AbstractArticlePDF–1.1M
4.
Detection of Human Immunodeficiency Virus Type 1 (HIV-1) A/AE Circulating Recombinant Form (CRF) in India: Possible Implications
RM Gupta, P Seth, VVSP Prasad, AK Sahni, J Jena
Med J Armed Forces India. 2006 Oct; 62(4): 316–320. Published online 2011 Jul 21. doi: 10.1016/S0377-1237(06)80095-X
PMCID:
PMC5034182
AbstractArticlePDF–3.0M
5.
Subtype Classification of Iranian HIV-1 Sequences Registered in the HIV Databases, 2006-2013
Kazem Baesi, Samaneh Moallemi, Molood Farrokhi, Seyed Ahmad Seyed Alinaghi, Hong–Ha M. Truong
PLoS One. 2014; 9(9): e105098. Published online 2014 Sep 4. doi: 10.1371/journal.pone.0105098
PMCID:
PMC4154867
AbstractArticlePDF–304K
6.
Genetic Analysis and Natural Polymorphisms in HIV-1 gp41 Isolates from Maputo City, Mozambique
Nália Ismael, Dulce Bila, Diana Mariani, Adolfo Vubil, Nedio Mabunda, Celina Abreu, Ilesh Jani, Amilcar Tanuri
AIDS Res Hum Retroviruses. 2014 Jun 1; 30(6): 603–609. doi: 10.1089/aid.2013.0244
PMCID:
PMC4046211
AbstractArticlePDF–578K
7.
Mechanism of HIV-1 RNA Dimerization in the Central Region of the Genome and Significance for Viral Evolution
Dorota Piekna-Przybylska, Gaurav Sharma, Robert A. Bambara
J Biol Chem. 2013 Aug 16; 288(33): 24140–24150. Published online 2013 Jul 9. doi: 10.1074/jbc.M113.477265
PMCID:
PMC3745356
AbstractArticlePDF–1.1M
8.
Estimating the Rate of Intersubtype Recombination in Early HIV-1 Group M Strains
Melissa J. Ward, Samantha J. Lycett, Marcia L. Kalish, Andrew Rambaut, Andrew J. Leigh Brown
J Virol. 2013 Feb; 87(4): 1967–1973. doi: 10.1128/JVI.02478-12
PMCID:
PMC3571495
AbstractArticlePDF–936K
9.
Prediction of R5, X4, and R5X4 HIV-1 Coreceptor Usage with Evolved Neural Networks
Susanna L. Lamers, Marco Salemi, Michael S. McGrath, Gary B. Fogel
IEEE/ACM Trans Comput Biol Bioinform. Author manuscript; available in PMC 2012 Dec 17.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2008 Apr-Jun; 5(2): 291–300. doi: 10.1109/TCBB.2007.1074
PMCID:
PMC3523352
AbstractArticlePDF–938K
10.
Universal Amplification, Next-Generation Sequencing, and Assembly of HIV-1 Genomes
Astrid Gall, Bridget Ferns, Clare Morris, Simon Watson, Matthew Cotten, Mark Robinson, Neil Berry, Deenan Pillay, Paul Kellam
J Clin Microbiol. 2012 Dec; 50(12): 3838–3844. doi: 10.1128/JCM.01516-12
PMCID:
PMC3502977
AbstractArticlePDF–1.8M
11.
Eastern Chimpanzees, but Not Bonobos, Represent a Simian Immunodeficiency Virus Reservoir
Yingying Li, Jean-Bosco Ndjango, Gerald H. Learn, Miguel A. Ramirez, Brandon F. Keele, Frederic Bibollet-Ruche, Weimin Liu, Juliet L. Easlick, Julie M. Decker, Rebecca S. Rudicell, Bila-Isia Inogwabini, Steve Ahuka-Mundeke, Fabian H. Leendertz, Vernon Reynolds, Martin N. Muller, Rebecca L. Chancellor, Aaron S. Rundus, Nicole Simmons, Michael Worobey, George M. Shaw, Martine Peeters, Paul M. Sharp, Beatrice H. Hahn
J Virol. 2012 Oct; 86(19): 10776–10791. doi: 10.1128/JVI.01498-12
PMCID:
PMC3457319
AbstractArticlePDF–2.3M
12.
New Strain of Simian Immunodeficiency Virus Identified in Wild-Born Chimpanzees from Central Africa
Sandrine Souquière, Maria Makuwa, Bettina Sallé, Mirdad Kazanji
PLoS One. 2012; 7(9): e44298. Published online 2012 Sep 12. doi: 10.1371/journal.pone.0044298
PMCID:
PMC3440395
AbstractArticlePDF–884K
13.
Sequence Quality Analysis Tool for HIV Type 1 Protease and Reverse Transcriptase
Allison K. DeLong, Mingham Wu, Diane Bennett, Neil Parkin, Zhijin Wu, Joseph W. Hogan, Rami Kantor
AIDS Res Hum Retroviruses. 2012 Aug; 28(8): 894–901. doi: 10.1089/aid.2011.0120
PMCID:
PMC3399557
AbstractArticlePDF–649K
14.
Efficient SIVcpz replication in human lymphoid tissue requires viral matrix protein adaptation
Frederic Bibollet-Ruche, Anke Heigele, Brandon F. Keele, Juliet L. Easlick, Julie M. Decker, Jun Takehisa, Gerald Learn, Paul M. Sharp, Beatrice H. Hahn, Frank Kirchhoff
J Clin Invest. 2012 May 1; 122(5): 1644–1652. Published online 2012 Apr 16. doi: 10.1172/JCI61429
PMCID:
PMC3336991
AbstractArticlePDF–1.2M
15.
HIV-1 Group P is unable to antagonize human tetherin by Vpu, Env or Nef
Daniel Sauter, Stéphane Hué, Sarah J Petit, Jean-Christophe Plantier, Greg J Towers, Frank Kirchhoff, Ravindra K Gupta
Retrovirology. 2011; 8: 103. Published online 2011 Dec 15. doi: 10.1186/1742-4690-8-103
PMCID:
PMC3285029
AbstractArticlePDF–5.2M
16.
Modulation of NKG2D-Mediated Cytotoxic Functions of Natural Killer Cells by Viral Protein R from HIV-1 Primary Isolates
Tram N. Q. Pham, Jonathan Richard, Francine C. A. Gerard, Christopher Power, Éric A. Cohen
J Virol. 2011 Dec; 85(23): 12254–12261. doi: 10.1128/JVI.05835-11
Correction in:
J Virol. 2012 Feb; 86(3): 1902.
PMCID:
PMC3209390
AbstractArticlePDF–1.5M
17.
High Prevalence of Simian Immunodeficiency Virus Infection in a Community of Savanna Chimpanzees
Rebecca S. Rudicell, Alex K. Piel, Fiona Stewart, Deborah L. Moore, Gerald H. Learn, Yingying Li, Jun Takehisa, Lilian Pintea, George M. Shaw, Jim Moore, Paul M. Sharp, Beatrice H. Hahn
J Virol. 2011 Oct; 85(19): 9918–9928. doi: 10.1128/JVI.05475-11
Correction in:
J Virol. 2022 Aug; 96(15): e00451-22.
PMCID:
PMC3196395
AbstractArticlePDF–1.0M
18.
Characterization of a new simian immunodeficiency virus strain in a naturally infected Pan troglodytes troglodytes chimpanzee with AIDS related symptoms
Lucie Etienne, Eric Nerrienet, Matthew LeBreton, Godwin Tafon Bibila, Yacouba Foupouapouognigni, Dominique Rousset, Ahmadou Nana, Cyrille F Djoko, Ubald Tamoufe, Avelin F Aghokeng, Eitel Mpoudi-Ngole, Eric Delaporte, Martine Peeters, Nathan D Wolfe, Ahidjo Ayouba
Retrovirology. 2011; 8: 4. Published online 2011 Jan 13. doi: 10.1186/1742-4690-8-4
PMCID:
PMC3034674
AbstractArticlePDF–1.5M
19.
Molecular Epidemiology of Simian Immunodeficiency Virus Infection in Wild-Living Gorillas
Cécile Neel, Lucie Etienne, Yingying Li, Jun Takehisa, Rebecca S. Rudicell, Innocent Ndong Bass, Joseph Moudindo, Aimé Mebenga, Amandine Esteban, Fran Van Heuverswyn, Florian Liegeois, Philip J. Kranzusch, Peter D. Walsh, Crickette M. Sanz, David B. Morgan, Jean-Bosco N. Ndjango, Jean-Christophe Plantier, Sabrina Locatelli, Mary K. Gonder, Fabian H. Leendertz, Christophe Boesch, Angelique Todd, Eric Delaporte, Eitel Mpoudi-Ngole, Beatrice H. Hahn, Martine Peeters
J Virol. 2010 Feb; 84(3): 1464–1476. Published online 2009 Nov 11. doi: 10.1128/JVI.02129-09
PMCID:
PMC2812320
AbstractArticlePDF–1.3M
20.
Discovery of novel targets for multi-epitope vaccines: Screening of HIV-1 genomes using association rule mining
Sinu Paul, Helen Piontkivska
Retrovirology. 2009; 6: 62. Published online 2009 Jul 6. doi: 10.1186/1742-4690-6-62
PMCID:
PMC2716299
AbstractArticlePDF–996K

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