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Select item 67216741.

Deep Sequencing Reveals Central Nervous System Compartmentalization in Multiple Transmitted/Founder Virus Acute HIV-1 Infection

Sodsai Tovanabutra, Rujipas Sirijatuphat, Phuc T. Pham, Lydia Bonar, Elizabeth A. Harbolick, Meera Bose, Hongshuo Song, David Chang, Celina Oropeza, Anne Marie O’Sullivan, Joyce Balinang, Eugene Kroon, Donn J. Colby, Carlo Sacdalan, Joanna Hellmuth, Phillip Chan, Peeriya Prueksakaew, Suteeraporn Pinyakorn, Linda L. Jagodzinski, Duanghathai Sutthichom, Suwanna Pattamaswin, Mark de Souza, Robert A. Gramzinski, Jerome H. Kim, Nelson L. Michael, Merlin L. Robb, Nittaya Phanuphak, Jintanat Ananworanich, Victor Valcour, Gustavo H. Kijak, Eric Sanders-Buell, Serena Spudich, The MHRP Viral Sequencing Core, the RV254/SEARCH 010 Study Team

Cells. 2019 Aug; 8(8): 902. Published online 2019 Aug 15. doi: 10.3390/cells8080902

PMCID:: PMC6721674

Abstract Article PDF–1.3M

Select item 53358142.

Rare HIV-1 Subtype J Genomes and a New H/U/CRF02_AG Recombinant Genome Suggests an Ancient Origin of HIV-1 in Angola

Inês Bártolo, Rita Calado, Pedro Borrego, Thomas Leitner, Nuno Taveira

AIDS Res Hum Retroviruses. 2016 Aug 1; 32(8): 822–828. Published online 2016 Aug 1. doi: 10.1089/aid.2016.0084

PMCID:: PMC5335814

Abstract Article PDF–543K

Select item 52679673.

Effect of HIV-1 Subtype C integrase mutations implied using molecular modeling and docking data

Jaiprasath Sachithanandham, Karnati Konda Reddy, King Solomon, Shoba David, Sanjeev Kumar Singh, Veena Vadhini Ramalingam, Susanne Alexander Pulimood, Ooriyapadickal Cherian Abraham, Pricilla Rupali, Gopalan Sridharan, Rajesh Kannangai

Bioinformation. 2016; 12(3): 221–230. Published online 2016 Jun 15. doi: 10.6026/97320630012221

PMCID:: PMC5267967

Abstract Article PDF–8.5M

Select item 48904714.

Short-term treatment outcomes in human immunodeficiency virus type-1 and hepatitis B virus co-infections

Kwamena William Coleman Sagoe, Kwabena Obeng Duedu, Francesca Ziga, Afrakoma Adjoa Agyei, Theophilus Korku Adiku, Margaret Lartey, Julius Abraham Addo Mingle, Max Arens

Ann Clin Microbiol Antimicrob. 2016; 15: 38. Published online 2016 Jun 2. doi: 10.1186/s12941-016-0152-2

PMCID:: PMC4890471

Abstract Article PDF–809K

Select item 43247695.

Performance of an In-House Human Immunodeficiency Virus Type 1 Genotyping System for Assessment of Drug Resistance in Cuba

Yoan Alemán, Lore Vinken, Vivian Kourí, Lissette Pérez, Alina Álvarez, Yeissel Abrahantes, Carlos Fonseca, Jorge Pérez, Consuelo Correa, Yudira Soto, Yoeri Schrooten, Anne-Mieke Vandamme, Kristel Van Laethem

PLoS One. 2015; 10(2): e0117176. Published online 2015 Feb 11. doi: 10.1371/journal.pone.0117176

PMCID:: PMC4324769

Abstract Article PDF–223K

Select item 39389476.

Short Communication: Molecular Epidemiology of HIV Type 1 Infection in Northern Greece (2009–2010): Evidence of a Transmission Cluster of HIV Type 1 Subtype A1 Drug-Resistant Strains Among Men Who Have Sex with Men

Zoi-Anna Antoniadou, Ioanna Kousiappa, Lemonia Skoura, Dimitris Pilalas, Simeon Metallidis, Pavlos Nicolaidis, Nicolaos Malisiovas, Leondios G. Kostrikis

AIDS Res Hum Retroviruses. 2014 Mar 1; 30(3): 225–232. doi: 10.1089/aid.2013.0166

PMCID:: PMC3938947

Abstract Article PDF–198K

Select item 39389317.

Prevalence of Drug Resistance in Human Immunodeficiency Virus Type 1-Infected Treatment-Naive Children in Pune, India

Mukesh Kumar, Sourav Sen, Rakesh K. Gupta, Devidas Chaturbhuj, Srikanth P. Tripathy, Ramesh S. Paranjape

AIDS Res Hum Retroviruses. 2014 Mar 1; 30(3): 294–298. doi: 10.1089/aid.2013.0222

PMCID:: PMC3938931

Abstract Article PDF–226K

Select item 33089258.

HIV-1 Subtype distribution in morocco based on national sentinel surveillance data 2004-2005

Mohammed Akrim, Sanae Lemrabet, Elmir Elharti, Rebecca R Gray, Jean Claude Tardy, Robert L Cook, Marco Salemi, Patrice Andre, Taj Azarian, Rajae El Aouad

AIDS Res Ther. 2012; 9: 5. Published online 2012 Feb 14. doi: 10.1186/1742-6405-9-5

PMCID:: PMC3308925

Abstract Article PDF–917K

Select item 32047579.

Novel HIV-1 Recombinant Forms in Antenatal Cohort, Montreal, Quebec, Canada

Mathieu Quesnel-Vallières, Iman Kouzayha, Evelyne Tran, Issatou Barry, Charlène Lasgi, Natacha Merindol, Vanessa Monteil, Doris G. Ransy, Marc Boucher, Normand Lapointe, Hugo Soudeyns

Emerg Infect Dis. 2011 Feb; 17(2): 271–274. doi: 10.3201/eid1702.100629

PMCID:: PMC3204757

Abstract Article PDF–519K

Select item 314313110.

The Spread of HIV in Pakistan: Bridging of the Epidemic between Populations

Muhammad R. Khanani, Mehreen Somani, Sadiq S. Rehmani, Nazle M. C. Veras, Marco Salemi, Syed H. Ali

PLoS One. 2011; 6(7): e22449. Published online 2011 Jul 25. doi: 10.1371/journal.pone.0022449

PMCID:: PMC3143131

Abstract Article PDF–261K

Select item 298138011.

Identification and Characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx Recombinant Subtypes in Mali, West Africa

Hiromi Imamichi, Ousmane Koita, Djeneba Dabitao, Sounkalo Dao, Mahamadou Ibrah, Dramane Sogoba, Robin L. Dewar, Steve C. Berg, Min-Kang Jiang, Mark Parta, Janice A. Washington, Michael A. Polis, H. Clifford Lane, Anatole Tounkara

AIDS Res Hum Retroviruses. 2009 Jan; 25(1): 45–55. doi: 10.1089/aid.2008.0111

PMCID:: PMC2981380

Abstract Article PDF–304K

Select item 296458612.

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form

Thushan I de Silva, Roxanne Turner, Stéphane Hué, Roochi Trikha, Carla van Tienen, Clayton Onyango, Assan Jaye, Brian Foley, Hilton Whittle, Sarah L Rowland-Jones, Matthew Cotten

Retrovirology. 2010; 7: 82. Published online 2010 Oct 9. doi: 10.1186/1742-4690-7-82

PMCID:: PMC2964586

Abstract Article PDF–2.3M

Select item 273819613.

Subtype-Specific Differences in the Human Immunodeficiency Virus Type 1 Reverse Transcriptase Connection Subdomain of CRF01_AE Are Associated with Higher Levels of Resistance to 3′-Azido-3′-Deoxythymidine

Krista A. Delviks-Frankenberry, Galina N. Nikolenko, Frank Maldarelli, Saiki Hase, Yutaka Takebe, Vinay K. Pathak

J Virol. 2009 Sep; 83(17): 8502–8513. Published online 2009 Jun 24. doi: 10.1128/JVI.00859-09

PMCID:: PMC2738196

Abstract Article PDF–1.2M

Select item 271629914.

Discovery of novel targets for multi-epitope vaccines: Screening of HIV-1 genomes using association rule mining

Sinu Paul, Helen Piontkivska

Retrovirology. 2009; 6: 62. Published online 2009 Jul 6. doi: 10.1186/1742-4690-6-62

PMCID:: PMC2716299

Abstract Article PDF–996K

Select item 266666015.

Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences

Nobubelo K Ngandu, Konrad Scheffler, Penny Moore, Zenda Woodman, Darren Martin, Cathal Seoighe

Virol J. 2008; 5: 160. Published online 2008 Dec 23. doi: 10.1186/1743-422X-5-160

PMCID:: PMC2666660

Abstract Article PDF–920K

Select item 259735716.

Human Immunodeficiency Virus Type 1 Reverse-Transcriptase and Protease Subtypes: Classification, Amino Acid Mutation Patterns, and Prevalence in a Northern California Clinic-Based Population

Matthew J. Gonzales, Rhoderick N. Machekano, Robert W. Shafer

J Infect Dis. Author manuscript; available in PMC 2008 Dec 8.

Published in final edited form as: J Infect Dis. 2001 Oct 15; 184(8): 998–1006. Published online 2001 Sep 10. doi: 10.1086/323601

PMCID:: PMC2597357

Abstract Article PDF–1.0M

Select item 229274317.

Exceptional molecular and coreceptor-requirement properties of molecular clones isolated from an Human Immunodeficiency Virus Type-1 subtype C infection

Prasanta K Dash, Nagadenahalli B Siddappa, Asokan Mangaiarkarasi, Aruna V Mahendarkar, Padmanabhan Roshan, Krishnamurthy Kumar Anand, Anita Mahadevan, Parthasarathy Satishchandra, Susarla K Shankar, Vinayaka R Prasad, Udaykumar Ranga

Retrovirology. 2008; 5: 25. Published online 2008 Mar 7. doi: 10.1186/1742-4690-5-25