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Select item 69955241.

Genomic, Transcriptomic and Enzymatic Insight into Lignocellulolytic System of a Plant Pathogen Dickeya sp. WS52 to Digest Sweet Pepper and Tomato Stalk

Ying-Jie Yang, Wei Lin, Raghvendra Pratap Singh, Qian Xu, Zhihou Chen, Yuan Yuan, Ping Zou, Yiqiang Li, Chengsheng Zhang

Biomolecules. 2019 Dec; 9(12): 753. Published online 2019 Nov 20. doi: 10.3390/biom9120753

PMCID:: PMC6995524

Abstract Article PDF–2.7M

Select item 67714682.

Time-Course Transcriptome Analysis for Drug Repositioning in Fusobacterium nucleatum-Infected Human Gingival Fibroblasts

Wenyan Kang, Zhilong Jia, Di Tang, Xiaojing Zhao, Jinlong Shi, Qian Jia, Kunlun He, Qiang Feng

Front Cell Dev Biol. 2019; 7: 204. Published online 2019 Sep 20. doi: 10.3389/fcell.2019.00204

PMCID:: PMC6771468

Abstract Article PDF–3.5M

Select item 67484223.

Scope and efficacy of the broad-spectrum topical antiseptic choline geranate

Joshua R. Greene, Kahla L. Merrett, Alexanndra J. Heyert, Lucas F. Simmons, Camille M. Migliori, Kristen C. Vogt, Rebeca S. Castro, Paul D. Phillips, Joseph L. Baker, Gerrick E. Lindberg, David T. Fox, Rico E. Del Sesto, Andrew T. Koppisch

PLoS One. 2019; 14(9): e0222211. Published online 2019 Sep 17. doi: 10.1371/journal.pone.0222211

PMCID:: PMC6748422

Abstract Article PDF–2.7M

Select item 67339114.

Bacterial Valorization of Lignin: Strains, Enzymes, Conversion Pathways, Biosensors, and Perspectives

Siseon Lee, Minsik Kang, Jung-Hoon Bae, Jung-Hoon Sohn, Bong Hyun Sung

Front Bioeng Biotechnol. 2019; 7: 209. Published online 2019 Sep 3. doi: 10.3389/fbioe.2019.00209

PMCID:: PMC6733911

Abstract Article PDF–996K

Select item 66432795.

Substrate Profile of the Phosphotriesterase Homology Protein from Escherichia coli

Venkatesh V. Nemmara, Dao Feng Xiang, A. A. Fedorov, E. V. Fedorov, Jeffrey B. Bonanno, Steven C. Almo, Frank M. Raushel

Biochemistry. Author manuscript; available in PMC 2019 Oct 30.

Published in final edited form as: Biochemistry. 2018 Oct 30; 57(43): 6219–6227. Published online 2018 Oct 16. doi: 10.1021/acs.biochem.8b00935

PMCID:: PMC6643279

Abstract Article PDF–1022K

Select item 66076016.

Internalization and accumulation of model lignin breakdown products in bacteria and fungi

Meghan C. Barnhart-Dailey, Dongmei Ye, Dulce C. Hayes, Danae Maes, Casey T. Simoes, Leah Appelhans, Amanda Carroll-Portillo, Michael S. Kent, Jerilyn A. Timlin

Biotechnol Biofuels. 2019; 12: 175. Published online 2019 Jul 3. doi: 10.1186/s13068-019-1494-8

PMCID:: PMC6607601

Abstract Article PDF–6.3M

Select item 64568637.

The Prophages of Citrobacter rodentium Represent a Conserved Family of Horizontally Acquired Mobile Genetic Elements Associated with Enteric Evolution towards Pathogenicity

Samuel J. Magaziner, Ziyue Zeng, Bihe Chen, George P. C. Salmond

J Bacteriol. 2019 May 1; 201(9): e00638-18. Prepublished online 2019 Feb 19. Published online 2019 Apr 9. doi: 10.1128/JB.00638-18

PMCID:: PMC6456863

Abstract Article PDF–3.9M

Select item 63082298.

NAT/NCS2-hound: a webserver for the detection and evolutionary classification of prokaryotic and eukaryotic nucleobase-cation symporters of the NAT/NCS2 family

A Chaliotis, P Vlastaridis, C Ntountoumi, M Botou, V Yalelis, P Lazou, E Tatsaki, D Mossialos, S Frillingos, G D Amoutzias

Gigascience. 2018 Dec; 7(12): giy133. Published online 2018 Nov 10. doi: 10.1093/gigascience/giy133

PMCID:: PMC6308229

Abstract Article PDF–1.5M

Select item 61745639.

Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC

Thomas Eng, Philipp Demling, Robin A. Herbert, Yan Chen, Veronica Benites, Joel Martin, Anna Lipzen, Edward E. K. Baidoo, Lars M. Blank, Christopher J. Petzold, Aindrila Mukhopadhyay

Microb Cell Fact. 2018; 17: 159. Published online 2018 Oct 8. doi: 10.1186/s12934-018-1006-8

PMCID:: PMC6174563

Abstract Article PDF–3.1M

Select item 615328010.

Roles of distal aspartate and arginine of B-class dye-decolorizing peroxidase in heterolytic hydrogen peroxide cleavage

Vera Pfanzagl, Kevin Nys, Marzia Bellei, Hanna Michlits, Georg Mlynek, Gianantonio Battistuzzi, Kristina Djinovic-Carugo, Sabine Van Doorslaer, Paul G. Furtmüller, Stefan Hofbauer, Christian Obinger

J Biol Chem. 2018 Sep 21; 293(38): 14823–14838. Published online 2018 Aug 2. doi: 10.1074/jbc.RA118.004773

PMCID:: PMC6153280

Abstract Article PDF–2.8M

Select item 612729411.

Jungle Express is a versatile repressor system for tight transcriptional control

Thomas L. Ruegg, Jose H. Pereira, Joseph C. Chen, Andy DeGiovanni, Pavel Novichkov, Vivek K. Mutalik, Giovani P. Tomaleri, Steven W. Singer, Nathan J. Hillson, Blake A. Simmons, Paul D. Adams, Michael P. Thelen

Nat Commun. 2018; 9: 3617. Published online 2018 Sep 6. doi: 10.1038/s41467-018-05857-3

Correction in:: Nat Commun. 2018; 9: 4596.

PMCID:: PMC6127294

Abstract Article PDF–2.6M

Select item 612537212.

Comparative Genomics Reveal a Flagellar System, a Type VI Secretion System and Plant Growth-Promoting Gene Clusters Unique to the Endophytic Bacterium Kosakonia radicincitans

Matthias Becker, Sascha Patz, Yvonne Becker, Beatrice Berger, Mario Drungowski, Boyke Bunk, Jörg Overmann, Cathrin Spröer, Jochen Reetz, Gylaine V. Tchuisseu Tchakounte, Silke Ruppel

Front Microbiol. 2018; 9: 1997. Published online 2018 Aug 30. doi: 10.3389/fmicb.2018.01997

PMCID:: PMC6125372

Abstract Article PDF–8.1M

Select item 611696713.

Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast

Douglas A. Higgins, Megan K. M. Young, Mary Tremaine, Maria Sardi, Jenna M. Fletcher, Margaret Agnew, Lisa Liu, Quinn Dickinson, David Peris, Russell L. Wrobel, Chris Todd Hittinger, Audrey P. Gasch, Steven W. Singer, Blake A. Simmons, Robert Landick, Michael P. Thelen, Trey K. Sato

Genetics. 2018 Sep; 210(1): 219–234. Published online 2018 Jul 25. doi: 10.1534/genetics.118.301161