PMC Links for Taxonomy (Select 2049024) - PMC

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Items: 20

Select item 68667031.

Circulating levels of the anti-oxidant indoleproprionic acid are associated with higher gut microbiome diversity

Cristina Menni, Marisa Matey Hernandez, Marius Vital, Robert P. Mohney, Tim D. Spector, Ana M. Valdes

Gut Microbes. 2019; 10(6): 688–695. Published online 2019 Apr 29. doi: 10.1080/19490976.2019.1586038

PMCID:: PMC6866703

Abstract Article PDF–2.3M

Select item 68394832.

Bacterial Metabolites Mirror Altered Gut Microbiota Composition in Patients with Parkinson’s Disease

Sebastiaan P. van Kessel, Sahar El Aidy

J Parkinsons Dis. 2019; 9(Suppl 2): S359–S370. Prepublished online 2019 Oct 9. Published online 2019 Oct 30. doi: 10.3233/JPD-191780

PMCID:: PMC6839483

Abstract Article PDF–100K

Select item 68049743.

Enriched taxa were found among the gut microbiota of centenarians in East China

Na Wang, Rui Li, Haijiang Lin, Chaowei Fu, Xuecai Wang, Yiming Zhang, Meifang Su, Peixin Huang, Junhua Qian, Feng Jiang, Hexing Wang, Lufang Jiang, Xin Yu, Jianxiang Liu, Yue Chen, Qingwu Jiang

PLoS One. 2019; 14(10): e0222763. Published online 2019 Oct 22. doi: 10.1371/journal.pone.0222763

PMCID:: PMC6804974

Abstract Article PDF–1.1M

Select item 67385824.

Baseline human gut microbiota profile in healthy people and standard reporting template

Charles H. King, Hiral Desai, Allison C. Sylvetsky, Jonathan LoTempio, Shant Ayanyan, Jill Carrie, Keith A. Crandall, Brian C. Fochtman, Lusine Gasparyan, Naila Gulzar, Paul Howell, Najy Issa, Konstantinos Krampis, Lopa Mishra, Hiroki Morizono, Joseph R. Pisegna, Shuyun Rao, Yao Ren, Vahan Simonyan, Krista Smith, Sharanjit VedBrat, Michael D. Yao, Raja Mazumder

PLoS One. 2019; 14(9): e0206484. Published online 2019 Sep 11. doi: 10.1371/journal.pone.0206484

PMCID:: PMC6738582

Abstract Article PDF–2.6M

Select item 67283295.

Metagenomic and culturomic analysis of gut microbiota dysbiosis during Clostridium difficile infection

Sophie Amrane, Marie Hocquart, Pamela Afouda, Edmond Kuete, Thi-Phuong-Thao Pham, Niokhor Dione, Issa Isaac Ngom, Camille Valles, Dipankar Bachar, Didier Raoult, Jean Christophe Lagier

Sci Rep. 2019; 9: 12807. Published online 2019 Sep 5. doi: 10.1038/s41598-019-49189-8

PMCID:: PMC6728329

Abstract Article PDF–2.0M

Select item 64123296.

Effect of Selected Stilbenoids on Human Fecal Microbiota

Jose D. Jaimes, Veronika Jarosova, Ondrej Vesely, Chahrazed Mekadim, Jakub Mrazek, Petr Marsik, Jiri Killer, Karel Smejkal, Pavel Kloucek, Jaroslav Havlik

Molecules. 2019 Feb; 24(4): 744. Published online 2019 Feb 19. doi: 10.3390/molecules24040744

PMCID:: PMC6412329

Abstract Article PDF–2.4M

Select item 63676897.

Commensal Gut Bacteria Convert the Immunosuppressant Tacrolimus to Less Potent Metabolites

Yukuang Guo, Camila Manoel Crnkovic, Kyoung-Jae Won, Xiaotong Yang, John Richard Lee, Jimmy Orjala, Hyunwoo Lee, Hyunyoung Jeong

Drug Metab Dispos. 2019 Mar; 47(3): 194–202. Published online 2019 Mar. doi: 10.1124/dmd.118.084772

PMCID:: PMC6367689

Abstract Article PDF–1007K

Select item 63566658.

Metabolomics and Microbiomes as Potential Tools to Evaluate the Effects of the Mediterranean Diet

Qi Jin, Alicen Black, Stefanos N. Kales, Dhiraj Vattem, Miguel Ruiz-Canela, Mercedes Sotos-Prieto

Nutrients. 2019 Jan; 11(1): 207. Published online 2019 Jan 21. doi: 10.3390/nu11010207

PMCID:: PMC6356665

Abstract Article PDF–1.3M

Select item 61939879.

Metagenomics reveals functional synergy and novel polysaccharide utilization loci in the Castor canadensis fecal microbiome

Zachary Armstrong, Keith Mewis, Feng Liu, Connor Morgan-Lang, Melanie Scofield, Evan Durno, Hong Ming Chen, Kevin Mehr, Stephen G. Withers, Steven J. Hallam

ISME J. 2018 Nov; 12(11): 2757–2769. Published online 2018 Jul 16. doi: 10.1038/s41396-018-0215-9

PMCID:: PMC6193987

Abstract Article PDF–1.1M

Select item 570770910.

In Vitro Fermentation Patterns of Rice Bran Components by Human Gut Microbiota

Tung Pham, Brett J. Savary, Keat (Thomas) Teoh, Ming-Hsuan Chen, Anna McClung, Sun-Ok Lee

Nutrients. 2017 Nov; 9(11): 1237. Published online 2017 Nov 12. doi: 10.3390/nu9111237

PMCID:: PMC5707709

Abstract Article PDF–870K

Select item 555292711.

Gut microbiome diversity influenced more by the Westernized dietary regime than the body mass index as assessed using effect size statistic

Shannon C. Davis, Jagjit S. Yadav, Stephanie D. Barrow, Boakai K. Robertson

Microbiologyopen. 2017 Aug; 6(4): e00476. Published online 2017 Jul 4. doi: 10.1002/mbo3.476

PMCID:: PMC5552927

Abstract Article PDF–1021K

Select item 507389012.

Comparative genomics of Clostridium bolteae and Clostridium clostridioforme reveals species-specific genomic properties and numerous putative antibiotic resistance determinants

Pierre Dehoux, Jean Christophe Marvaud, Amr Abouelleil, Ashlee M. Earl, Thierry Lambert, Catherine Dauga

BMC Genomics. 2016; 17: 819. Published online 2016 Oct 21. doi: 10.1186/s12864-016-3152-x

PMCID:: PMC5073890

Abstract Article PDF–1014K

Select item 505001213.

Meta-analyses of human gut microbes associated with obesity and IBD

William A. Walters, Zech Xu, Rob Knight

FEBS Lett. Author manuscript; available in PMC 2016 Oct 4.

Published in final edited form as: FEBS Lett. 2014 Nov 17; 588(22): 4223–4233. Published online 2014 Oct 13. doi: 10.1016/j.febslet.2014.09.039

PMCID:: PMC5050012

Abstract Article PDF–1.5M

Select item 496129914.

16S rRNA amplicon sequencing dataset for conventionalized and conventionally raised zebrafish larvae

Daniel J. Davis, Elizabeth C. Bryda, Catherine H. Gillespie, Aaron C. Ericsson

Data Brief. 2016 Sep; 8: 938–943. Published online 2016 Jul 5. doi: 10.1016/j.dib.2016.06.057

PMCID:: PMC4961299

Abstract Article PDF–181K

Select item 477773415.

Insights on Alterations to the Rumen Ecosystem by Nitrate and Nitrocompounds

Elizabeth A. Latham, Robin C. Anderson, William E. Pinchak, David J. Nisbet

Front Microbiol. 2016; 7: 228. Published online 2016 Mar 4. doi: 10.3389/fmicb.2016.00228

PMCID:: PMC4777734

Abstract Article PDF–370K

Select item 471528716.

Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

Veronika B. Dubinkina, Dmitry S. Ischenko, Vladimir I. Ulyantsev, Alexander V. Tyakht, Dmitry G. Alexeev

BMC Bioinformatics. 2016; 17: 38. Published online 2016 Jan 16. doi: 10.1186/s12859-015-0875-7

PMCID:: PMC4715287

Abstract Article PDF–1.5M

Select item 435122917.

Fecal microbes, short chain fatty acids, and colorectal cancer across racial/ethnic groups

Christina M Hester, Venkatakrishna R Jala, Morgan GI Langille, Shahid Umar, K Allen Greiner, Bodduluri Haribabu

World J Gastroenterol. 2015 Mar 7; 21(9): 2759–2769. Published online 2015 Mar 7. doi: 10.3748/wjg.v21.i9.2759

PMCID:: PMC4351229

Abstract Article PDF–1.0M

Select item 433095918.

Effects of Surgical and Dietary Weight Loss Therapy for Obesity on Gut Microbiota Composition and Nutrient Absorption

Antje Damms-Machado, Suparna Mitra, Asja E. Schollenberger, Klaus Michael Kramer, Tobias Meile, Alfred Königsrainer, Daniel H. Huson, Stephan C. Bischoff

Biomed Res Int. 2015; 2015: 806248. Published online 2015 Feb 1. doi: 10.1155/2015/806248