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Items: 17

1.
Determination of picomolar levels of methylmercury complexes with low molecular mass thiols by liquid chromatography tandem mass spectrometry and online preconcentration
Van Liem-Nguyen, Hoang-Tung Nguyen-Ngoc, Gbotemi A. Adediran, Erik Björn
Anal Bioanal Chem. 2020; 412(7): 1619–1628. Published online 2020 Jan 16. doi: 10.1007/s00216-020-02389-y
PMCID:
PMC7026298
AbstractArticlePDF–608K
2.
Predicting and Interpreting the Structure of Type IV Pilus of Electricigens by Molecular Dynamics Simulations
Chuanjun Shu, Ke Xiao, Changchang Cao, Dewu Ding, Xiao Sun
Molecules. 2017 Aug; 22(8): 1342. Published online 2017 Aug 12. doi: 10.3390/molecules22081342
PMCID:
PMC6152092
AbstractArticlePDF–4.1M
3.
Conservation of coevolving protein interfaces bridges prokaryote–eukaryote homologies in the twilight zone
Juan Rodriguez-Rivas, Simone Marsili, David Juan, Alfonso Valencia
Proc Natl Acad Sci U S A. 2016 Dec 27; 113(52): 15018–15023. Published online 2016 Dec 13. doi: 10.1073/pnas.1611861114
PMCID:
PMC5206536
AbstractArticlePDF–1.0M
4.
Network portal: a database for storage, analysis and visualization of biological networks
Serdar Turkarslan, Elisabeth J. Wurtmann, Wei-Ju Wu, Ning Jiang, J. Christopher Bare, Karen Foley, David J. Reiss, Pavel Novichkov, Nitin S. Baliga
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D184–D190. Published online 2013 Nov 23. doi: 10.1093/nar/gkt1190
PMCID:
PMC3964938
AbstractArticlePDF–2.9M
5.
Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms
Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés
Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869
PMCID:
PMC3927607
AbstractArticlePDF–2.0M
6.
New types of metacaspases in phytoplankton reveal diverse origins of cell death proteases
C J Choi, J A Berges
Cell Death Dis. 2013 Feb; 4(2): e490. Published online 2013 Feb 14. doi: 10.1038/cddis.2013.21
PMCID:
PMC3734836
AbstractArticlePDF–1.2M
7.
Distribution Analysis of Hydrogenases in Surface Waters of Marine and Freshwater Environments
Martin Barz, Christian Beimgraben, Torsten Staller, Frauke Germer, Friederike Opitz, Claudia Marquardt, Christoph Schwarz, Kirstin Gutekunst, Klaus Heinrich Vanselow, Ruth Schmitz, Julie LaRoche, Rüdiger Schulz, Jens Appel
PLoS One. 2010; 5(11): e13846. Published online 2010 Nov 5. doi: 10.1371/journal.pone.0013846
PMCID:
PMC2974642
AbstractArticlePDF–850K
8.
Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea
Yvan Zivanovic, Jean Armengaud, Arnaud Lagorce, Christophe Leplat, Philippe Guérin, Murielle Dutertre, Véronique Anthouard, Patrick Forterre, Patrick Wincker, Fabrice Confalonieri
Genome Biol. 2009; 10(6): R70. Published online 2009 Jun 26. doi: 10.1186/gb-2009-10-6-r70
PMCID:
PMC2718504
AbstractArticlePDF–1.2M
9.
Minimum Contradiction Matrices in Whole Genome Phylogenies
Marc Thuillard
Evol Bioinform Online. 2008; 4: 237–247. Published online 2008 Jul 21. doi: 10.4137/ebo.s909
PMCID:
PMC2614196
AbstractArticlePDF–498K
10.
Genome Evolution and the Emergence of Fruiting Body Development in Myxococcus xanthus
Barry Goldman, Swapna Bhat, Lawrence J. Shimkets
PLoS One. 2007; 2(12): e1329. Published online 2007 Dec 26. doi: 10.1371/journal.pone.0001329
PMCID:
PMC2129111
AbstractArticlePDF–339K
11.
Identification of Prophages in Bacterial Genomes by Dinucleotide Relative Abundance Difference
K. V. Srividhya, V. Alaguraj, G. Poornima, Dinesh Kumar, G. P. Singh, L. Raghavenderan, A. V. S. K. Mohan Katta, Preeti Mehta, S. Krishnaswamy
PLoS One. 2007; 2(11): e1193. Published online 2007 Nov 21. doi: 10.1371/journal.pone.0001193
PMCID:
PMC2075365
AbstractArticlePDF–295K
12.
Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12
Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa Ensman, Frank Stanley, Michael Trelinski, Peter Ortoleva
Algorithms Mol Biol. 2007; 2: 2. Published online 2007 Mar 30. doi: 10.1186/1748-7188-2-2
PMCID:
PMC1852316
AbstractArticlePDF–707K
13.
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
Feng Chen, Aaron J. Mackey, Christian J. Stoeckert, Jr, David S. Roos
Nucleic Acids Res. 2006 Jan 1; 34(Database issue): D363–D368. Published online 2005 Dec 28. doi: 10.1093/nar/gkj123
PMCID:
PMC1347485
AbstractArticlePDF–373K
14.
A Method Adapting Microarray Technology for Signature-Tagged Mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in Anaerobic Sediment Survival Experiments
Jennifer L. Groh, Qingwei Luo, Jimmy D. Ballard, Lee R. Krumholz
Appl Environ Microbiol. 2005 Nov; 71(11): 7064–7074. doi: 10.1128/AEM.71.11.7064-7074.2005
PMCID:
PMC1287673
AbstractArticlePDF–320K
15.
Diversity in domain architectures of Ser/Thr kinases and their homologues in prokaryotes
A Krupa, N Srinivasan
BMC Genomics. 2005; 6: 129. Published online 2005 Sep 19. doi: 10.1186/1471-2164-6-129
PMCID:
PMC1262709
AbstractArticlePDF–746K
16.
Reconstruction of regulatory and metabolic pathways in metal-reducing δ-proteobacteria
Dmitry A Rodionov, Inna Dubchak, Adam Arkin, Eric Alm, Mikhail S Gelfand
Genome Biol. 2004; 5(11): R90. Published online 2004 Oct 22. doi: 10.1186/gb-2004-5-11-r90
PMCID:
PMC545781
AbstractArticlePDF–1.7M
17.
Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments
Purvesh Khatri, Pratik Bhavsar, Gagandeep Bawa, Sorin Draghici
Nucleic Acids Res. 2004 Jul 1; 32(Web Server issue): W449–W456. doi: 10.1093/nar/gkh409
PMCID:
PMC441547
AbstractArticlePDF–549K

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