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Select item 70278351.

Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition

Sigrid van Grinsven, Jaap S. Sinninghe Damsté, Alejandro Abdala Asbun, Julia C. Engelmann, John Harrison, Laura Villanueva

Environ Microbiol. 2020 Feb; 22(2): 766–782. Published online 2020 Jan 1. doi: 10.1111/1462-2920.14886

PMCID:: PMC7027835

Abstract Article PDF–1.3M

Select item 67883472.

Effects of Habitat Partitioning on the Distribution of Bacterioplankton in Deep Lakes

Nico Salmaso

Front Microbiol. 2019; 10: 2257. Published online 2019 Oct 4. doi: 10.3389/fmicb.2019.02257

PMCID:: PMC6788347

Abstract Article PDF–1.8M

Select item 64001893.

A three-domain copper-nitrite reductase with a unique sensing loop

Diederik Johannes Opperman, Daniel Horacio Murgida, Sergio Daniel Dalosto, Carlos Dante Brondino, Felix Martín Ferroni

IUCrJ. 2019 Mar 1; 6(Pt 2): 248–258. Published online 2019 Feb 9. doi: 10.1107/S2052252519000241

PMCID:: PMC6400189

Abstract Article PDF–1.2M

Select item 63151934.

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order Methylococcales) Calls for the Reclassification of Members at the Genus and Species Levels

Fabini D. Orata, Jan P. Meier-Kolthoff, Dominic Sauvageau, Lisa Y. Stein

Front Microbiol. 2018; 9: 3162. Published online 2018 Dec 19. doi: 10.3389/fmicb.2018.03162

PMCID:: PMC6315193

Abstract Article PDF–3.8M

Select item 62221255.

Members of the Genus Methylobacter Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland

Garrett J. Smith, Jordan C. Angle, Lindsey M. Solden, Mikayla A. Borton, Timothy H. Morin, Rebecca A. Daly, Michael D. Johnston, Kay C. Stefanik, Richard Wolfe, Bohrer Gil, Kelly C. Wrighton

mBio. 2018 Nov-Dec; 9(6): e00815-18. Published online 2018 Nov 6. doi: 10.1128/mBio.00815-18

PMCID:: PMC6222125

Abstract Article PDF–7.5M

Select item 58801516.

Bacterial copper storage proteins

Christopher Dennison, Sholto David, Jaeick Lee

J Biol Chem. 2018 Mar 30; 293(13): 4616–4627. Published online 2018 Feb 6. doi: 10.1074/jbc.TM117.000180

PMCID:: PMC5880151

Abstract Article PDF–2.7M

Select item 57768307.

SIMS analyses of the oldest known assemblage of microfossils document their taxon-correlated carbon isotope compositions

J. William Schopf, Kouki Kitajima, Michael J. Spicuzza, Anatoliy B. Kudryavtsev, John W. Valley

Proc Natl Acad Sci U S A. 2018 Jan 2; 115(1): 53–58. Published online 2017 Dec 18. doi: 10.1073/pnas.1718063115

PMCID:: PMC5776830

Abstract Article PDF–1.4M

Select item 55639648.

Crenothrix are major methane consumers in stratified lakes

Kirsten Oswald, Jon S Graf, Sten Littmann, Daniela Tienken, Andreas Brand, Bernhard Wehrli, Mads Albertsen, Holger Daims, Michael Wagner, Marcel MM Kuypers, Carsten J Schubert, Jana Milucka

ISME J. 2017 Sep; 11(9): 2124–2140. Published online 2017 Jun 6. doi: 10.1038/ismej.2017.77

PMCID:: PMC5563964

Abstract Article PDF–1.5M

Select item 55430849.

AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment

Petra Pjevac, Clemens Schauberger, Lianna Poghosyan, Craig W. Herbold, Maartje A. H. J. van Kessel, Anne Daebeler, Michaela Steinberger, Mike S. M. Jetten, Sebastian Lücker, Michael Wagner, Holger Daims

Front Microbiol. 2017; 8: 1508. Published online 2017 Aug 4. doi: 10.3389/fmicb.2017.01508

PMCID:: PMC5543084

Abstract Article PDF–1.5M

Select item 515275110.

Complete nitrification by Nitrospira bacteria

Holger Daims, Elena V. Lebedeva, Petra Pjevac, Ping Han, Craig Herbold, Mads Albertsen, Nico Jehmlich, Marton Palatinszky, Julia Vierheilig, Alexandr Bulaev, Rasmus H. Kirkegaard, Martin von Bergen, Thomas Rattei, Bernd Bendinger, Per H. Nielsen, Michael Wagner

Nature. Author manuscript; available in PMC 2016 Dec 12.

Published in final edited form as: Nature. 2015 Dec 24; 528(7583): 504–509. Published online 2015 Nov 26. doi: 10.1038/nature16461

PMCID:: PMC5152751

Abstract Article PDF–4.9M

Select item 510475011.

Methanotrophy under Versatile Conditions in the Water Column of the Ferruginous Meromictic Lake La Cruz (Spain)

Kirsten Oswald, Corinne Jegge, Jana Tischer, Jasmine Berg, Andreas Brand, María R. Miracle, Xavier Soria, Eduardo Vicente, Moritz F. Lehmann, Jakob Zopfi, Carsten J. Schubert

Front Microbiol. 2016; 7: 1762. Published online 2016 Nov 11. doi: 10.3389/fmicb.2016.01762

PMCID:: PMC5104750

Abstract Article PDF–1.2M

Select item 498930712.

Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters

Arda Gülay, Sanin Musovic, Hans-Jørgen Albrechtsen, Waleed Abu Al-Soud, Søren J Sørensen, Barth F Smets

ISME J. 2016 Sep; 10(9): 2209–2222. Published online 2016 Mar 8. doi: 10.1038/ismej.2016.16

PMCID:: PMC4989307

Abstract Article PDF–1.1M

Select item 487869013.

Complete nitrification by a single microorganism

Maartje A.H.J. van Kessel, Daan R. Speth, Mads Albertsen, Per H. Nielsen, Huub J.M. Op den Camp, Boran Kartal, Mike S.M. Jetten, Sebastian Lücker

Nature. Author manuscript; available in PMC 2016 May 26.

Published in final edited form as: Nature. 2015 Dec 24; 528(7583): 555–559. Published online 2015 Nov 26. doi: 10.1038/nature16459

PMCID:: PMC4878690

Abstract Article PDF–10M

Select item 486362114.

Metagenomic Evidence for the Presence of Comammox Nitrospira-Like Bacteria in a Drinking Water System

Ameet J. Pinto, Daniel N. Marcus, Umer Zeeshan Ijaz, Quyen Melina Bautista-de lose Santos, Gregory J. Dick, Lutgarde Raskin

mSphere. 2016 Jan-Feb; 1(1): e00054-15. Published online 2015 Dec 30. doi: 10.1128/mSphere.00054-15

PMCID:: PMC4863621

Abstract Article PDF–2.7M

Select item 467820515.

Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker

Claudia Knief

Front Microbiol. 2015; 6: 1346. Published online 2015 Dec 15. doi: 10.3389/fmicb.2015.01346

PMCID:: PMC4678205

Abstract Article PDF–9.5M

Select item 417870216.

Gammaproteobacterial Methanotrophs Dominate Cold Methane Seeps in Floodplains of West Siberian Rivers

Igor Y. Oshkin, Carl-Eric Wegner, Claudia Lüke, Mikhail V. Glagolev, Illiya V. Filippov, Nikolay V. Pimenov, Werner Liesack, Svetlana N. Dedysh

Appl Environ Microbiol. 2014 Oct; 80(19): 5944–5954. doi: 10.1128/AEM.01539-14

PMCID:: PMC4178702

Abstract Article PDF–2.0M

Select item 417215617.

Aerobic methanotrophic communities at the Red Sea brine-seawater interface

Rehab Z. Abdallah, Mustafa Adel, Amged Ouf, Ahmed Sayed, Mohamed A. Ghazy, Intikhab Alam, Magbubah Essack, Feras F. Lafi, Vladimir B. Bajic, Hamza El-Dorry, Rania Siam

Front Microbiol. 2014; 5: 487. Published online 2014 Sep 23. doi: 10.3389/fmicb.2014.00487

PMCID:: PMC4172156

Abstract Article PDF–4.0M

Select item 410250118.

Unraveling the Stratification of an Iron-Oxidizing Microbial Mat by Metatranscriptomics

Achim Quaiser, Xavier Bodi, Alexis Dufresne, Delphine Naquin, André-Jean Francez, Alexandra Dheilly, Sophie Coudouel, Mathieu Pedrot, Philippe Vandenkoornhuyse

PLoS One. 2014; 9(7): e102561. Published online 2014 Jul 17. doi: 10.1371/journal.pone.0102561

PMCID:: PMC4102501

Abstract Article PDF–1.6M

Select item 392713619.

Classification of pmoA amplicon pyrosequences using BLAST and the lowest common ancestor method in MEGAN

Marc G. Dumont, Claudia Lüke, Yongcui Deng, Peter Frenzel

Front Microbiol. 2014; 5: 34. Prepublished online 2013 Oct 12. Published online 2014 Feb 18. doi: 10.3389/fmicb.2014.00034

PMCID:: PMC3927136

Abstract Article PDF–1.8M

Select item 363523720.

Methanotrophic bacteria in oilsands tailings ponds of northern Alberta

Alireza Saidi-Mehrabad, Zhiguo He, Ivica Tamas, Christine E Sharp, Allyson L Brady, Fauziah F Rochman, Levente Bodrossy, Guy CJ Abell, Tara Penner, Xiaoli Dong, Christoph W Sensen, Peter F Dunfield

ISME J. 2013 May; 7(5): 908–921. Published online 2012 Dec 20. doi: 10.1038/ismej.2012.163