PMC Links for Taxonomy (Select 755172) - PMC

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Items: 16

Select item 69948001.

Anaerosphaera massiliensis sp. nov., a new bacterium isolated from the stool of a 39-year-old Pygmy

T. Takakura, R. Francis, H. Anani, M. Bilen, D. Raoult, J.Y. Bou Khalil

New Microbes New Infect. 2020 Jan; 33: 100633. Published online 2019 Dec 12. doi: 10.1016/j.nmni.2019.100633

Expression of Concern in:: New Microbes New Infect. 2024 Jun; 59: 101255.

PMCID:: PMC6994800

Article PDF–1.2M

Select item 69368452.

Transfer of skin microbiota between two dissimilar autologous microenvironments: A pilot study

Benji Perin, Amin Addetia, Xuan Qin

PLoS One. 2019; 14(12): e0226857. Published online 2019 Dec 30. doi: 10.1371/journal.pone.0226857

PMCID:: PMC6936845

Article PDF–1.4M

Select item 69157783.

Postmenopause as a key factor in the composition of the Endometrial Cancer Microbiome (ECbiome)

Dana M. Walsh, Alexis N. Hokenstad, Jun Chen, Jaeyun Sung, Gregory D. Jenkins, Nicholas Chia, Heidi Nelson, Andrea Mariani, Marina R. S. Walther-Antonio

Sci Rep. 2019; 9: 19213. Published online 2019 Dec 16. doi: 10.1038/s41598-019-55720-8

PMCID:: PMC6915778

Article PDF–3.4M

Select item 69092234.

Urinicoccus massiliensis gen. nov., sp. nov., a new bacterium isolated from a human urine sample from a 7-year-old boy hospitalized for dental care

E.K. Yimagou, H. Anani, A. Yacouba, I. Hasni, J.-P. Baudoin, D. Raoult, J.Y. Bou Khalil

New Microbes New Infect. 2019 Nov; 32: 100615. Published online 2019 Oct 30. doi: 10.1016/j.nmni.2019.100615

Expression of Concern in:: New Microbes New Infect. 2024 Jun; 59: 101404.

PMCID:: PMC6909223

Article PDF–939K

Select item 68053395.

SEPATH: benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines

Abraham Gihawi, Ghanasyam Rallapalli, Rachel Hurst, Colin S. Cooper, Richard M. Leggett, Daniel S. Brewer

Genome Biol. 2019; 20: 208. Published online 2019 Oct 22. doi: 10.1186/s13059-019-1819-8

PMCID:: PMC6805339

Article PDF–1.7M

Select item 66987976.

Development and Validation of a Reference Data Set for Assigning Staphylococcus Species Based on Next-Generation Sequencing of the 16S-23S rRNA Region

Maja Kosecka-Strojek, Artur J. Sabat, Viktoria Akkerboom, Karsten Becker, Evert van Zanten, Guido Wisselink, Jacek Miedzobrodzki, Anna M. D. (Mirjam) Kooistra-Smid, Alexander W. Friedrich

Front Cell Infect Microbiol. 2019; 9: 278. Published online 2019 Aug 7. doi: 10.3389/fcimb.2019.00278

PMCID:: PMC6698797

Article PDF–1.7M

Select item 65286157.

Miniphocibacter massiliensis gen. nov., sp. nov., a new species isolated from the human gut and its taxono‐genomics description

Melhem Bilen, Maxime D. Mbogning Fonkou, Thi T. Nguyen, Magali Richez, Ziad Daoud, Pierre E. Fournier, Didier Raoult, Frédéric Cadoret

Microbiologyopen. 2019 May; 8(5): e00735. Published online 2018 Oct 2. doi: 10.1002/mbo3.735

PMCID:: PMC6528615

Article PDF–1.1M

Select item 64364838.

Description of three new Peptoniphilus species cultured in the vaginal fluid of a woman diagnosed with bacterial vaginosis: Peptoniphilus pacaensis sp. nov., Peptoniphilus raoultii sp. nov., and Peptoniphilus vaginalis sp. nov.

Khoudia Diop, Awa Diop, Caroline Michelle, Magali Richez, Jaishriram Rathored, Florence Bretelle, Pierre‐Edouard Fournier, Florence Fenollar

Microbiologyopen. 2019 Mar; 8(3): e00661. Published online 2018 Jun 21. doi: 10.1002/mbo3.661

PMCID:: PMC6436483

Article PDF–1.3M

Select item 60119299.

Characterization of a novel Gram‐stain‐positive anaerobic coccus isolated from the female genital tract: Genome sequence and description of Murdochiella vaginalis sp. nov.

Khoudia Diop, Awa Diop, Saber Khelaifia, Catherine Robert, Fabrizio Di Pinto, Jérémy Delerce, Didier Raoult, Pierre‐Edouard Fournier, Florence Bretelle, Florence Fenollar

Microbiologyopen. 2018 Jun; 7(3): e00570. Published online 2018 May 9. doi: 10.1002/mbo3.570

PMCID:: PMC6011929

Article PDF–985K

Select item 591813910.

Peptoniphilus lacydonensis sp. nov., a new human-associated species isolated from a patient with chronic refractory sinusitis

M. Beye, S. Bakour, E. Le Dault, J. Rathored, C. Michelle, F. Cadoret, D. Raoult, P.-E. Fournier

New Microbes New Infect. 2018 May; 23: 61–69. Published online 2018 Feb 28. doi: 10.1016/j.nmni.2018.02.007

PMCID:: PMC5918139

Article PDF–1.0M

Select item 546979111.

Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species

Artur J. Sabat, Evert van Zanten, Viktoria Akkerboom, Guido Wisselink, Kees van Slochteren, Richard F. de Boer, Ron Hendrix, Alexander W. Friedrich, John W. A. Rossen, Anna M. D. (Mirjam) Kooistra-Smid

Sci Rep. 2017; 7: 3434. Published online 2017 Jun 13. doi: 10.1038/s41598-017-03458-6

PMCID:: PMC5469791

Article PDF–1.0M

Select item 529473312.

‘Peptoniphilus urinimassiliensis’ sp. nov., a new bacterial species isolated from a human urine sample after de novo kidney transplantation

S. Brahimi, F. Cadoret, P.-E. Founier, V. Moal, D. Raoult

New Microbes New Infect. 2017 Mar; 16: 49–50. Published online 2017 Jan 7. doi: 10.1016/j.nmni.2017.01.001

Expression of Concern in:: New Microbes New Infect. 2024 Jun; 59: 101376.

PMCID:: PMC5294733

Article PDF–190K

Select item 502414213.

‘Urinacoccus massiliensis’ gen. nov. sp. nov., identified in urine sample of a 7-year-old boy hospitalized for dental care under general anaesthesia

A. Morand, F. Cornu, M. Tsimaratos, F. Cadoret, J.-C. Lagier, P.E. Fournier, D. Raoult

New Microbes New Infect. 2016 Nov; 14: 36–37. Published online 2016 Aug 4. doi: 10.1016/j.nmni.2016.07.017

Expression of Concern in:: New Microbes New Infect. 2024 Jun; 59: 101403.

PMCID:: PMC5024142

Article PDF–320K

Select item 492591314.

‘Peptoniphilus pacaensis’ sp. nov., a new species isolated from human female genital tract

K. Diop, F. Bretelle, O. Mediannikov, P.-E. Fournier, F. Fenollar

New Microbes New Infect. 2016 Sep; 13: 37–39. Published online 2016 Jun 11. doi: 10.1016/j.nmni.2016.06.007

PMCID:: PMC4925913

Article PDF–299K

Select item 451644815.

Impact of dietary deviation on disease progression and gut microbiome composition in lupus-prone SNF₁ mice

B M Johnson, M-C Gaudreau, M M Al-Gadban, R Gudi, C Vasu

Clin Exp Immunol. 2015 Aug; 181(2): 323–337. Published online 2015 Jul 14. doi: 10.1111/cei.12609

PMCID:: PMC4516448

Article PDF–1.0M

Select item 451226716.

High Voltage Electrochemiluminescence (ECL) as a New Method for Detection of PAH During Screening for PAH-Degrading Microbial Consortia

Justyna Staninska, Zuzanna Szczepaniak, Krzysztof Staninski, Jakub Czarny, Agnieszka Piotrowska-Cyplik, Jacek Nowak, Roman Marecik, Łukasz Chrzanowski, Paweł Cyplik

Water Air Soil Pollut. 2015; 226(8): 270. Published online 2015 Jul 24. doi: 10.1007/s11270-015-2532-1