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Anxa9 annexin A9 [ Rattus norvegicus (Norway rat) ]

Gene ID: 689830, updated on 9-Dec-2024

Summary

Official Symbol
Anxa9provided by RGD
Official Full Name
annexin A9provided by RGD
Primary source
RGD:1587550
See related
EnsemblRapid:ENSRNOG00000021134 AllianceGenome:RGD:1587550
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable acetylcholine receptor activity; calcium-dependent phospholipid binding activity; and phosphatidylserine binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be located in cell surface and cytosol. Predicted to be active in several cellular components, including nucleus; plasma membrane; and vesicle membrane. Orthologous to human ANXA9 (annexin A9). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in Kidney (RPKM 14.6), Lung (RPKM 13.7) and 9 other tissues See more
Orthologs
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Genomic context

See Anxa9 in Genome Data Viewer
Location:
2q34
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (185562174..185572560, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (182873185..182884501, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (196470318..196481568, complement)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene prune exopolyphosphatase 1 Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene ceramide synthase 2 Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables acetylcholine receptor activity  
enables calcium ion binding  
enables calcium-dependent phospholipid binding  
enables phosphatidylserine binding  
enables phosphatidylserine binding  
enables phospholipid binding  
Component Evidence Code Pubs
located_in cell surface  
is_active_in cytoplasm  
located_in cytosol  
is_active_in nucleus  
is_active_in plasma membrane  
located_in synapse  
is_active_in vesicle membrane  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001427412.1NP_001414341.1  annexin A9

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002
    UniProtKB/TrEMBL
    A6K2Y2, D3ZSA0
    Related
    ENSRNOP00000028693.6, ENSRNOT00000028693.8

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    185562174..185572560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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