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Tex13b testis expressed 13B [ Mus musculus (house mouse) ]

Gene ID: 83555, updated on 9-Dec-2024

Summary

Official Symbol
Tex13bprovided by MGI
Official Full Name
testis expressed 13Bprovided by MGI
Primary source
MGI:MGI:1890544
See related
Ensembl:ENSMUSG00000042386 AllianceGenome:MGI:1890544
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tex13; 4933403J23Rik
Summary
Is expressed in testis. Orthologous to human TEX13B (testis expressed 13B). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Tex13b in Genome Data Viewer
Location:
X F1; X 61.5 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (139709056..139714182, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (140808307..140813433, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2C, 5 Neighboring gene STARR-seq mESC enhancer starr_48009 Neighboring gene eukaryotic translation initiation factor 2C, 2 pseudogene Neighboring gene ribosomal protein S7 pseudogene Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_48010

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Gene Ontology Provided by MGI

General protein information

Preferred Names
testis-expressed protein 13B
Names
testis expressed gene 13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031381.3NP_113558.1  testis-expressed protein 13B

    See identical proteins and their annotated locations for NP_113558.1

    Status: VALIDATED

    Source sequence(s)
    AL672306
    Consensus CDS
    CCDS41152.1
    UniProtKB/TrEMBL
    Q99MW5
    Related
    ENSMUSP00000046203.8, ENSMUST00000044179.8
    Conserved Domains (1) summary
    pfam15186
    Location:4150
    TEX13; Testis-expressed sequence 13 protein family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    139709056..139714182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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