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Map9 microtubule-associated protein 9 [ Mus musculus (house mouse) ]

Gene ID: 213582, updated on 9-Dec-2024

Summary

Official Symbol
Map9provided by MGI
Official Full Name
microtubule-associated protein 9provided by MGI
Primary source
MGI:MGI:2442208
See related
Ensembl:ENSMUSG00000033900 AllianceGenome:MGI:2442208
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ASAP; Mtap9; 5033421J10Rik; 5330427D05Rik
Summary
Predicted to enable microtubule binding activity. Acts upstream of or within mitotic spindle assembly. Located in astral microtubule and mitotic spindle midzone. Orthologous to human MAP9 (microtubule associated protein 9). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in CNS E18 (RPKM 17.3), cortex adult (RPKM 9.4) and 9 other tissues See more
Orthologs
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Genomic context

See Map9 in Genome Data Viewer
Location:
3 E3; 3 36.37 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (82265379..82302575)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (82358072..82395268)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 29921 Neighboring gene STARR-seq mESC enhancer starr_08033 Neighboring gene predicted gene, 57713 Neighboring gene STARR-seq mESC enhancer starr_08035 Neighboring gene STARR-positive B cell enhancer mm9_chr3:82161796-82162097 Neighboring gene STARR-seq mESC enhancer starr_08038 Neighboring gene neuropeptide Y receptor Y2 Neighboring gene predicted gene, 29999

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

Interactions

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables microtubule binding  
enables microtubule binding  
enables microtubule binding  
Component Evidence Code Pubs
located_in aster PubMed 
is_active_in astral microtubule  
located_in astral microtubule PubMed 
located_in astral microtubule  
located_in axon  
located_in axon  
located_in cytoplasm  
located_in microtubule cytoskeleton PubMed 
located_in mitotic spindle PubMed 
located_in mitotic spindle  
located_in mitotic spindle midzone PubMed 
located_in spindle midzone  

General protein information

Preferred Names
microtubule-associated protein 9
Names
aster-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081230.1NP_001074699.1  microtubule-associated protein 9

    See identical proteins and their annotated locations for NP_001074699.1

    Status: VALIDATED

    Source sequence(s)
    AC126248, AC126557
    Consensus CDS
    CCDS38461.1
    UniProtKB/Swiss-Prot
    Q3TRR0, Q3UUD1, Q3UX85, Q3UXE7, Q5M8N8, Q6P8K1, Q8BMM4, Q8BYP7
    UniProtKB/TrEMBL
    A0A0A6YXJ3
    Related
    ENSMUSP00000088535.5, ENSMUST00000091014.10
    Conserved Domains (1) summary
    PTZ00121
    Location:445622
    PTZ00121; MAEBL; Provisional
  2. NM_001356457.1NP_001343386.1  microtubule-associated protein 9

    Status: VALIDATED

    Source sequence(s)
    AC126248, AC126557, AK147287
    Consensus CDS
    CCDS38461.1
    UniProtKB/Swiss-Prot
    Q3TRR0, Q3UUD1, Q3UX85, Q3UXE7, Q5M8N8, Q6P8K1, Q8BMM4, Q8BYP7
    UniProtKB/TrEMBL
    A0A0A6YXJ3
    Related
    ENSMUSP00000142206.2, ENSMUST00000195640.2
    Conserved Domains (1) summary
    PTZ00121
    Location:445622
    PTZ00121; MAEBL; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    82265379..82302575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030252539.2XP_030108399.1  microtubule-associated protein 9 isoform X1

    UniProtKB/Swiss-Prot
    Q3TRR0, Q3UUD1, Q3UX85, Q3UXE7, Q5M8N8, Q6P8K1, Q8BMM4, Q8BYP7
    UniProtKB/TrEMBL
    A0A0A6YXJ3
    Conserved Domains (1) summary
    PTZ00121
    Location:445622
    PTZ00121; MAEBL; Provisional
  2. XM_030252540.2XP_030108400.1  microtubule-associated protein 9 isoform X1

    UniProtKB/Swiss-Prot
    Q3TRR0, Q3UUD1, Q3UX85, Q3UXE7, Q5M8N8, Q6P8K1, Q8BMM4, Q8BYP7
    UniProtKB/TrEMBL
    A0A0A6YXJ3
    Conserved Domains (1) summary
    PTZ00121
    Location:445622
    PTZ00121; MAEBL; Provisional
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