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nucleolin [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842817, updated on 18-Sep-2024

Summary

Official Full Name
nucleolin
Primary source
TAIR:AT1G65090
Locus tag
AT1G65090
See related
Araport:AT1G65090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (24180830..24183300, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene 4-coumarate:CoA ligase 3 Neighboring gene DNA mismatch repair protein MutS, type 2 Neighboring gene Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene SCR-like 2

Interactions

General gene information

NM_001160975.1
NM_001198387.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm  
located_in lipid droplet PubMed 
located_in nucleus  

General protein information

Preferred Names
nucleolin
NP_001154447.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1234 Blast hits to 904 proteins in 178 species: Archae - 0; Bacteria - 58; Metazoa - 431; Fungi - 95; Plants - 83; Viruses - 38; Other Eukaryotes - 529 (source: NCBI BLink).
NP_001185316.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1).
NP_176689.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits to 1033 proteins in 192 species: Archae - 0; Bacteria - 61; Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42; Other Eukaryotes - 598 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24180830..24183300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105183.4NP_176689.2  nucleolin [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176689.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q680C1, Q84WS6
    Conserved Domains (1) summary
    PTZ00121
    Location:114210
    PTZ00121; MAEBL; Provisional
  2. NM_001160975.1NP_001154447.1  nucleolin [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154447.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WS15, F4I9U3
    Conserved Domains (1) summary
    PTZ00121
    Location:89210
    PTZ00121; MAEBL; Provisional
  3. NM_001198387.1NP_001185316.1  nucleolin [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185316.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WS15, F4I9U2
    Conserved Domains (1) summary
    PTZ00121
    Location:114210
    PTZ00121; MAEBL; Provisional
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