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SEC5A exocyst complex component sec5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844020, updated on 18-Sep-2024

Summary

Official Symbol
SEC5A
Official Full Name
exocyst complex component sec5
Primary source
TAIR:AT1G76850
Locus tag
AT1G76850
See related
Araport:AT1G76850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
exocyst complex component sec5; F7O12.2; F7O12_2
Summary
Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.
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Genomic context

See SEC5A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Sequence:
Chromosome: 1; NC_003070.9 (28847871..28854499)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene transcription factor Neighboring gene ncRNA Neighboring gene Duplicated homeodomain-like superfamily protein

Interactions

General gene information

NM_106336.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytosol PubMed 
part_of exocyst  
located_in extracellular exosome PubMed 
located_in nucleus  
located_in plasma membrane PubMed 
located_in plasmodesma PubMed 

General protein information

Preferred Names
exocyst complex component sec5
NP_177811.2
  • exocyst complex component sec5 (SEC5A); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen germination, pollen tube growth; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Exocyst complex component SEC5 (TAIR:AT1G21170.1); Has 532 Blast hits to 503 proteins in 167 species: Archae - 0; Bacteria - 2; Metazoa - 234; Fungi - 147; Plants - 83; Viruses - 4; Other Eukaryotes - 62 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28847871..28854499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106336.4NP_177811.2  exocyst complex component sec5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177811.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WL36, Q541W6, Q8S3U9, Q9C6K6
    UniProtKB/TrEMBL
    A0A178WKT0
    Conserved Domains (1) summary
    pfam15469
    Location:267443
    Sec5; Exocyst complex component Sec5
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