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Submitted SNP(ss) Details: ss116422541           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000008_NCBI36.1_chr5_68968
RefSNP(rs#)rs28672830
Submitted Batch IDILLUMINA_WTSI:NA18507_c5
Submitted DateJan 17, 2009
Publication Cited18987734
First entry to dbSNPJan 17 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss116422541|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 GCATGCACAT TGCTAAGTGG AAGAGGACAG TCTGAGGAGG ATACATACAG TGTGATCTCA
 TTTAATAAGA CACTGGAGAA GGCAAACTAC ACAGATGGGA AGCCATTGGC TCCATGGGGT
 GGGGGTTTGA AGCCTTCCAT ATGATACTTT AATAGTGGGA TATCTGCCAC AATGCATTTG
 TCAAAATACA CAGAATTTTA TGGCCAAATG GGTAAATCAA ACTCTATTCA AATTAAATAA
 AATTACTCAG
 Y
 ACGTGGAGTA TCCCAGGACA GAATACATCA TGTGAAAAAT AATTTAACTA TGCTACAAAT
 TACTATGGTT TGGATGTGGT TTGTCCCCGC AAAAACTCAG GTTGAAATTT GACCCCCAAT
 GTGGCAGTGT GGGGCGGTGG GGCCTAGTGG AAGGTGTTTG GGTCATGGGG ATGGATCTCT
 CATGAATAGA TTAATGTCCT CCATGGGGGT GAGTGAGTTC TGCTCTCACA GGAATGGATT
 AATTCCTGCA

  Submitted Frequency for ss116422541 back to top
There is no frequency submission for ss116422541.


  dbSNP summary of Genotypes for ss116422541 back to top
No sufficient data to compute Hardy-weinberg probability for ss116422541.


  Submitted individual genotype for ss116422541 back to top
There is no individual genotype data for ss116422541.

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