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Submitted SNP(ss) Details: ss12724201           
Submitter
HandleEGP_SNPS
Submitter SNP IDIGFBP2-000954
RefSNP(rs#)rs9341091
Submitted Batch IDIGFBP2-PDR90-100703
Submitted DateOct 08, 2003
Publication Cited[1] NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
First entry to dbSNPOct 8 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		GENOMIC
MethodMETHOD-E
Ascertainment Samplesize154
PopulationPDR90
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote DetectedY
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12724201|allelePos=256|len=511|taxid=9606|alleles='A/G'|mol=Genomic
 ATTTCTTTTC TTCAAAGCCT CTGATAAACa tttatttatt tattttttat CTTACCAAAG
 TCTTTCCCGA TAACTCTTCC CAGCTTGGCG TCTTAAGACC AGGAACTTGC CTTCCTGGAG
 GCATCTAGGT CACCTTCAGA GCCAGGTGGC CATTGGGTTA ACTAGCTGTT GAACTGAATC
 AAACAGGCTC TGAGCCTTGA AGTCAGAAAG AGCCAGAGTG GAGGGGTCTG GGGGGAAGAG
 GGGCGCTGAG GTATA
 R
 GGAGATGAAA CCTGCGGTGG AGGCAGCTTA ATGGTCCACC TGTCACCCAA GGAATCTCTC
 TGACAGGGGT CTTTGTTAGG GTCACACCCC AGGAGATGGT TGATTATGGC TGAGTCCAGC
 CTGGAATGAT GGGGGTTGGG GGCAGCTTGG GTAGATGACT CAGTAAATCA AACAGAACAA
 TGAAAGGAGG TCATGCTTGT CCATCTGCAT TATTGAAGAC AGCCATAAAT GGCCTTACCC
 CAGAGCGGGT CTGTC

  Submitted Frequency for ss12724201 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
PDR90154G=0.99350601
A=0.00649400
0.013 +/-0.018IGFBP2-PDR90-100703EGP_SNPS


  dbSNP summary of Genotypes for ss12724201 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
PDR90154154G=0.99350649
A=0.00649351G/G=0.98701298
A/G=0.01298701
Pr(chiSq=0.000,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss12724201 back to top
There is no individual genotype data for ss12724201.

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