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Submitted SNP(ss) Details: ss162979338           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chrY_3104007
RefSNP(rs#)rs2534047
Submitted Batch IDNA07022_snpassay_chrY
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162979338|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 TAGGATATTT ATGGTTTTAG GTCTTATGTT TAAGTCTGTA ATCTCATTCT TTTTATGGCT
 GAATAGTATT CCATTATGTA TATTTTCCAC ATTTTTAATA AATCCAGTTT ACCATTGATG
 AACATTTAGT TTAATTCCAT GTCTTGTTAT TGTCAATAAT GCCACGATGT ATATATGCAT
 GCATGTGTCT TTACAGTAGA ATGATTTCTA TTCCATTGGG TATATAATCA CTGGGTCAAA
 TGGTAGTTCT
 R
 TTTCAAGTTT TTCAAGAAAT TGACAACTGT TTTCTGCAGT GACTGAACTG CTTTACATTC
 CCACCGGCTA TATATAAGTG TTCCCTTTTC TCTACAACTT CACCACCATC TGTTATTTTT
 TTGACTTTTT AATAATGCCC ATACTGACTT GTGTGAGATG GTATCTCATT GTGGTTGTGA
 CTTGCATTTC TCTAACAAAT AGTGATGTTG AGCATTTTTT ATGTGCTTGT TGGCTGCATG
 TAAGTTTTCT

  Submitted Frequency for ss162979338 back to top
There is no frequency submission for ss162979338.


  dbSNP summary of Genotypes for ss162979338 back to top
No sufficient data to compute Hardy-weinberg probability for ss162979338.


  Submitted individual genotype for ss162979338 back to top
There is no individual genotype data for ss162979338.

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