NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss167615848           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr15_18426412
RefSNP(rs#)rs883046
Submitted Batch IDNA07022_snpassay_chr15
Submitted DateSep 30, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 30 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss167615848|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 AACAGCATAA GGACCTCAGG AGAACAATTA TATTATGGGT CTAATTCTGT ACCCACTGCA
 GACCAGTTTA TTTTTATAGA CCAGCAGCTC CAGTCTATCA CAACCTATGA TTATCCAGAT
 GGAAGGAAAC AGTCTTCAAA TTTTTATGAC AGATGCGGTA AGATAAACTG ATATTTCTGT
 CATTTGTTTT CTAGGCCCAG GTCTTGTAGC TCCTGGCCAT GGGGCACTGT GGTGCTCTCT
 GATTTGGGGC
 R
 TTTGAAGGAT ACTGGAAAAT AGTATTGTCC TCAAAACTGA CTTTCTTTAG AGACTAATTT
 TTCTACTATG AAACAGTGGC ATAAAACATC TGGTATAATA CTCATATGGG ACTGGAGAGA
 CTGAAGTCAA TTCTCCCATT GTTCTCCTGG GTCTCTGTCT GGGCAACTGT GAAAAGACAA
 AGCACTGCTG GATCCCTGCT CATGTTCTTA CGATCACGTC TCCTATCCCT AACAACAGCT
 ACATTCCTTT

  Submitted Frequency for ss167615848 back to top
There is no frequency submission for ss167615848.


  dbSNP summary of Genotypes for ss167615848 back to top
No sufficient data to compute Hardy-weinberg probability for ss167615848.


  Submitted individual genotype for ss167615848 back to top
There is no individual genotype data for ss167615848.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement