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Submitted SNP(ss) Details: ss2086850           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC0226218
RefSNP(rs#)rs1318938
Submitted Batch ID001018_18
Submitted DateOct 19, 2000
Publication CitedN.D.
First entry to dbSNPOct 19 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-WUGSC-1-2
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2086850|allelePos=163|len=1287|taxid=9606|alleles='A/C'|mol=Genomic
 GGGAGAAACC TTTTACAGAT AAGTTACAAA CAAAGAAAAG GCAAATAAAC AATTTTGTAC
 AAGAAATTTA ACACATTCTG TACAAGGTCT TCACTTTGCT GTCATCATTT GTACAAACTT
 TGAAAAAGAA GAAGTACCCA AAAAATGAGT CAATAGCAAA AG
 M
 CCaaaaaaaa aaaaaaaaaa aaTCACATTT ACTCAATTAC TGAGTACTCT TTCCATTCCT
 CTCTTTCCTC AGAATTACCA TTAAGTACAG AGGGAAGCTA GTTTATTGCC CAGGCTGGAA
 CTTCATTAAC CATAACTATT CAGGTTTATT AGTAAGAGCC AAATTAACGC TTTAGATAGG
 CCAATATAAA AAAGAGCATT CTTGGCTCTT AGTTTAGACT TGAATTTTAA GTCTGCTGGA
 TTACAAGACA ATATTGTAAA TTCAATGCTA TGGGCTAGGT TTAATTTTTA TAACATTACA
 TTTTATGCTC TTTTCTAAGT TAAGTAGTTA CATCATGAAA AAAATACAGA GTTTTACTCA
 AAATCCTTCA GTTTCATATG CCTTGCTTCC TGATATGGCC ATCTTAAAAG TTAGTAGATA
 CGATACTTTT GAAGCACATG TAAACTTCAG TTTCAGACTA AAGCCAATTA AAGAAAAAAG
 ACAATACAGT GCGGGGAAAG AAAGTCACAT TAATTTCATT TTAGGAAACT TGGAATAAGT
 TTGCTTTCCA CATTGTTCCA CAATCACACA AACACTGAAc agtgcttctc aaactttata
 catgaatcac ccaagaatcc tattaaaatg ctgattCCAG GTGTAGGGAT AGAACCTGAT
 AGTAAATATT TCTAAATTAA GTTCTCAAGT CAGAGCAATG TTACCTAGTC TGCAGACAAC
 ACTCTGAATT TTAAGAAGGT TAAATGTAAG TAACTGTTTT AGCAACCTAA TTTGGGGGGA
 AGGGTCACTA ATTTCGATCA GTTCCCTAAC AAAGAGCCTC TTATCTTAAA AATCAAAGTG
 AAGAATGAGG CGTGAGACTG AAACATTTAC CTTCATAGTT TACTTGACCA TCACCATCAA
 TATCTGCTTC CCTGATCATT TCATCAACTT CTTCATCTGT TAACTTCTCT CCAAGGTTTG
 TCATCACATG GCGAAGTTCT GCAGCACTAA TATAGCCATT GCCATCCTAG CAAAAAATTT
 AGTATAGTTT CTGAGTCAAA TTACAGACTT GAGAGTTGGA ATGGAAATTT ATTAAGTTTA
 CTACTAAATT TCACATTGGG GGAAAAACAT ACTTTAGAAA TGCA

  Submitted Frequency for ss2086850 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
CEPH
MULTI-NATIONAL
184A=0.98000002
C=0.02000000
0.039 +/-0.0281_2004SEQUENOM


  dbSNP summary of Genotypes for ss2086850 back to top
No sufficient data to compute Hardy-weinberg probability for ss2086850.


  Submitted individual genotype for ss2086850 back to top
There is no individual genotype data for ss2086850.

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