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Submitted SNP(ss) Details: ss2923999           
Submitter
HandleUWGC
Submitter SNP IDmnat1-e1+t36
RefSNP(rs#)rs2020891
Submitted Batch IDmnat1.1
Submitted DateJan 10, 2001
Publication Cited[1] Gene based polymorphism discovery
First entry to dbSNPJan 10 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodRESEQ_POLYPHRED_CONFIRM
Ascertainment Samplesize86
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2923999|allelePos=51|len=101|taxid=9606|alleles='C/T'|mol=Genomic
 ACGATCAGGG TTGCCCTCGG TGTAAGACCA CCAAATATCG GAACCCCTCC
 Y
 TGAAGCTGAT GGTGAATGTG TGCGGACACA CTCTGTGAGT TGGGCGGCAG

  Submitted Frequency for ss2923999 back to top
There is no frequency submission for ss2923999.


  dbSNP summary of Genotypes for ss2923999 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
NIHPDR
NORTH AMERICA
8686C=0.97674417
T=0.02325581C/C=0.95348835
C/T=0.04651163
Pr(chiSq=0.001,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss2923999 back to top
There is no individual genotype data for ss2923999.

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