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Submitted SNP(ss) Details: ss35031524           
Submitter
HandleABI
Submitter SNP IDhCV11198239
RefSNP(rs#)rs28360496
Submitted Batch IDxplore_hum_chr6_1
Submitted DateJul 19, 2005
Publication CitedN.D.
First entry to dbSNPJul 19 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 4
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35031524|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 ATCATTTGTG CATGCTTGAG TTGCAGGACA TCAAACATCA TGAAATTAAA ACGAAAATAC
 AATAGCTAGA TGCTACTGTC TTAACCCTTA TGGTGTTTTC CTTTTTTAAA AATTTAACCA
 AACCTTCTAT CGAATTAAGA ATACAAACAG GCAATTCTGA GAGAGCCTTA CTGATAGAAA
 ATATGAGACA CATCTGTGAT TTCTGAATGA CATGAGTAAG GATATCTCAG TTCTCGCCAA
 GGCATTTCTC ATGGGGGCCA AACGTCAACT TGGAAACCAA TAGTTGTCAC ACTTACAAAG
 Y
 TATGCCATCT CCATAAGCTA GACTGAGACC AACCCCTCTG AGACAAGACA ATTGACCCAT
 AGATCAGTTG GCTGTAGCTG GGGTGACATG CTGGCAAAAG TAAAAAAATT CCACAATCAA
 TTCAAGTGTT TGCCTGAGGC CAGGGACGGG AGCAGGCAAG GAAGCAGAGA GAGGTTTTGG
 GGGTGGTGGA AGTGTTCTAA AAGCAAATCA TGGATGATGG TAGCACAAAT GTATAAATTT
 ACTAAAACTC AAACTGTCCA CTTAAGATGA GTAAATTTTA TGGTATGTGA ATTGTACATC

  Submitted Frequency for ss35031524 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_Chinese
EAST ASIA
90C=0.91000003
T=0.09000000
xplore_hum_chr6_1ABI
AoD_African_American
NORTH AMERICA
90C=0.92000002
T=0.08000000
xplore_hum_chr6_1ABI
AoD_Caucasian
NORTH AMERICA
92C=0.79000002
T=0.20999999
xplore_hum_chr6_1ABI
AoD_Japanese
EAST ASIA
90C=0.89999998
T=0.10000000
xplore_hum_chr6_1ABI


  dbSNP summary of Genotypes for ss35031524 back to top
No sufficient data to compute Hardy-weinberg probability for ss35031524.


  Submitted individual genotype for ss35031524 back to top
There is no individual genotype data for ss35031524.

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