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Submitted SNP(ss) Details: ss50017580           
Submitter
HandleDEVINE_LAB
Submitter SNP IDINDEL_GP35_WGS_197478
RefSNP(rs#)clustering in process
Submitted Batch IDEMORY_INDEL_GP35_WGS
Submitted DateJan 24, 2006
Publication Cited[1] An initial map of insertion and deletion (INDEL) variation in the human genome
First entry to dbSNPJan 24 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodMETHOD_WGS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss50017580|allelePos=401|len=800|taxid=9606|alleles='TT/-'|mol=Genomic
 GACAGCGGAA AGTGGAAGCA GCGAGAGAAT TAAAAAAAAA AAAAAAGTGC CTAATGGGTA
 CTATGCTTAT TACCTGTGTG ACAAAATAAT CTGTACATCA AACATCAAAT CATGCAATTT
 GCCTTTATAA CAAACCTGCA CATGTACCCT TGACCCTAAA ATAAAAGTTA AAAAGTATCT
 TTTGGGGAAA GGAAGACATT AGAGAAAAGA GCAGTTCATA AAGACATGCA GTAAAGATAA
 CAAAGTTTGG TATACACATA CACATACTTG CACCTGCTGA ATATTAGAGT CTTTTTATTT
 TGTCTATTAT AGTTTGCAGA GGAGAACCCT CAAACATATT TTTACATTTA GATATTCCAA
 TAAATGTAAA AATTGTACAG ACAGACTATC CTCATCTTAC
 N
 TTTTTTTTTT TTGAGGAAAA AATATTTGGG AATTAGAATG GTAAGTGCTT TTCTGAAGTT
 TGTATAGTTA GTAAGTCATG GAGACTATAC ACAAACTCAG CCTTGAGATT CAACCTCCAC
 ATTGCTGTCC ATGGCACCAA GTTCACAAAT TGAACAGGAA GAAAGTTTAT GCAATCTAGA
 AGAGAACATT TTCTTAGACA CAAATGATAT AAAAGAAGGC TTGTTCTTCT CCTAAACTGT
 GAAGAGACAT TGATATTATA TTGAAAACTT GTACCTGGAG AAAATATCCA CAGCTTCTTA
 GTTTATGCAG AATATAACAA CTGATCTGAT GTTATAAGTT CTACCACAGC AGAGCATACT
 ACTCTCAAGT TATCACTTTT GGCTTCAGTT TCTAATTAA

  Submitted Frequency for ss50017580 back to top
There is no frequency submission for ss50017580.


  dbSNP summary of Genotypes for ss50017580 back to top
No sufficient data to compute Hardy-weinberg probability for ss50017580.


  Submitted individual genotype for ss50017580 back to top
There is no individual genotype data for ss50017580.

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