NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss50017584           
Submitter
HandleDEVINE_LAB
Submitter SNP IDINDEL_GP35_WGS_197483
RefSNP(rs#)clustering in process
Submitted Batch IDEMORY_INDEL_GP35_WGS
Submitted DateJan 24, 2006
Publication Cited[1] An initial map of insertion and deletion (INDEL) variation in the human genome
First entry to dbSNPJan 24 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodMETHOD_WGS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed Allele-/TATTA
Ancestral Allele-
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss50017584|allelePos=401|len=801|taxid=9606|alleles='-/TATTA'|mol=Genomic
 CACATCACTT CCCTCTTTTT AATTGGCCAG ATCAAGTCAT GTTCCCAAAC CAAATCTCAA
 TGGACAGGGA ATATAATTAT CCCACAAGGA GTGGCTTGAC AGGCAGGAAT CCTAGATATT
 TCAAATAAAT GAGACTATAC CCAAAATTAA AACACATTTT ATATGACCCA GTATCCCAGC
 ATATATGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTATATAT ATATATATAT
 ATATATATAT ATATATATAT ATATATATAC ATGTTAACCA GTGCAGGGAA CATAGTAGGT
 GCACAATAAG TATTTTTTAA ATGGATACAT GAATGATTAT ATTAACCAAG AAAATATTAT
 ATGATGTACT CTGATGTTTC TAAGATATTG TATCTTTTGT
 N
 ATTATATTCT ATTTTATTTT TGTAAAGTGC TAATCATGGC CCACTAAATT GATTTCATGA
 ACCACAATTT AAAAGCATTC ATTAACAAAT ATAAGAATGT GAAAGCAATA TTATTTTCAA
 TGCTTGATTC TGTTTTTTTT TATCCTATGA AAACACAGGA AACATTAATT GAACATCTTC
 TGTGTGCTAG TTTTGTCAGT ATTGGTGTCA TGAAATAATT ATAAGGACTT GAATTAGACA
 TTTAAGAAGT CCAGGGTTAA CATCTTCACA ACTAATTTAA AAGAAACATA TGGTAATAGC
 TCCCATAAGA GAGATGTATA AACTGGGGTA GATCTGAAAA GGTTTTCCCA AGAAAGTAAT
 GCTTAAACGA GGGCATGATA ATGAATAATA TGATTCTGAA

  Submitted Frequency for ss50017584 back to top
There is no frequency submission for ss50017584.


  dbSNP summary of Genotypes for ss50017584 back to top
No sufficient data to compute Hardy-weinberg probability for ss50017584.


  Submitted individual genotype for ss50017584 back to top
There is no individual genotype data for ss50017584.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement