NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss50017593           
Submitter
HandleDEVINE_LAB
Submitter SNP IDINDEL_GP35_WGS_197493
RefSNP(rs#)rs869068216
Submitted Batch IDEMORY_INDEL_GP35_WGS
Submitted DateJan 24, 2006
Publication Cited[1] An initial map of insertion and deletion (INDEL) variation in the human genome
First entry to dbSNPJan 24 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodMETHOD_WGS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed Allele-/TCACAG
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss50017593|allelePos=401|len=801|taxid=9606|alleles='-/TCACAG'|mol=Genomic
 GGCCAAGGAG GACAGGAAAG CTCTCTGACC CACAGGTATC TGTGTTTAAT ATTCCATCCT
 AGTTTCTCTT TCTCTCTCTC CTCTTTCACT TCTCTCTCTC TGTCTCTCTT TCTCTCTCTC
 TCTCTCTTTC TTTTTGACAC AGGGTCTTGC TCTGTCGCCT AGGCTAGAGT ATAGCAGTGC
 AATCATGGCT CACTGCAGCC TCTACCTCCT GGGCTCAGAC GATTCTTCCA CCTAAGCCTC
 TTGAATAGTT GGGACTATAG GCATGCAGCA CCACAGCTGG CTAATTTTTT GTATTTATTG
 TAAAGATGGG ATTCACCATA TTGTCCAGAC TGGTCTTGAA CACCTGATCT CAAGTGATCC
 ACCCACCTGG GCCTCCCAAA GTGCTGTGAT TATATGGAGC
 N
 ACCTAGCTCC ATCCTAGTTT CTGACTCAAA CCAATATTTG TGTATACAGC TCATCCTCAG
 AATTGATCTT CCATAGCCTA AACAGAGGTA TGAGACACAA GGAAAATAGA GGTTACCCAG
 AAGAATGTTT AGAGCATCCT GCCATTCATC TTGAGAAGAT TCACTGTCTA CAACCAGAAT
 TGAGTTGACT TTGTCTTCCT CAGATGTGAT TTTGATGTTC TTGTGAGGCG GGTTGGAGTC
 AGAAGGGCCA TGGCTATTTG AATAAGTGAT GGCACATTCC TCCAGTGAGT CCTCAGGGAC
 TTCCTTTTCT TCAGCCTTCT GCTCCTCCCT GATGAGCCAG GTGGGATAGA AATGACAGAA
 GATTAAACAG AGAGGGATTG GATCCCAGGG AGACCTAGCT

  Submitted Frequency for ss50017593 back to top
There is no frequency submission for ss50017593.


  dbSNP summary of Genotypes for ss50017593 back to top
No sufficient data to compute Hardy-weinberg probability for ss50017593.


  Submitted individual genotype for ss50017593 back to top
There is no individual genotype data for ss50017593.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement