NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss50017607           
Submitter
HandleDEVINE_LAB
Submitter SNP IDINDEL_GP35_WGS_197510
RefSNP(rs#)clustering in process
Submitted Batch IDEMORY_INDEL_GP35_WGS
Submitted DateJan 24, 2006
Publication Cited[1] An initial map of insertion and deletion (INDEL) variation in the human genome
First entry to dbSNPJan 24 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodMETHOD_WGS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed Allele-/TGTGTA
Ancestral AlleleTGTGTA
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss50017607|allelePos=401|len=801|taxid=9606|alleles='-/TGTGTA'|mol=Genomic
 AGTTCACCAG CCTAATTCTT CATTTCTCCT GTCTCTTCAT CTAGGAAGGC ATAGTTTCTT
 CCTAGAAGAT AATTAATGAC AATCTAAAGG AAGTATATGA AATATGGCCA AGTGCGGTGC
 CTCATGCCTG TAACTCCCAA CACTTTGGGA GGTAAGGGCA AGAGGATCAC TTGAACCCAG
 GAATTTGAGA CCAGACTGGG TAACATGGCA AAACCCTACC TCTACAAAAT ATACAAAAAA
 TTAGCCAGGT GTGCTGGCAC ACATCTATGG TCCCAGCCAT TCGGGAGGAT CACCTGAGCC
 CGAGGAGGTT GAGGCTGCAG TGGGCCATCA TCACACCACT GCACTCCAGT CTGAATGACA
 GACTGAGACC CTGTCTCAAA AAAAAGAAAA AAAAAAATGT
 N
 GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT ATGTGTGAGA GCGAAATGAG
 AAATGTTGCA AGCAATCAAA AATCTTAAGC ATTTCTTTGA TGCTTCTAAT CACTAATTCT
 ATTTTTCCTC ACTGAGGACA TCCAGATAGA AAGACATTCA CATGTATAAA GTCCCTTCTA
 GACAAATAAT GGCCCTCAAA TATCTCCATG CCTTAATCTC TGGAAACTGT AAATATGTTA
 GATTACACAG CAAAAGGCAA TTTAGATTAA AGATGGGATT AAGGTTGCTG ATCAGCAGGC
 CTTAAAAAAT AGGAAGATTA ACCTAGATTA TCTAGGTGGG CCCAATAAAA CCTTAAAATT
 GTATAATTGC AGAAGAATGT CCTGTCAGGG AGATGCTACA

  Submitted Frequency for ss50017607 back to top
There is no frequency submission for ss50017607.


  dbSNP summary of Genotypes for ss50017607 back to top
No sufficient data to compute Hardy-weinberg probability for ss50017607.


  Submitted individual genotype for ss50017607 back to top
There is no individual genotype data for ss50017607.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement