Submitted SNP(ss) Details: ss66862127

Submitted SNP(ss) Details: ss66862127

Submitter
Handle	EGP_SNPS
Submitter SNP ID	ASNA1_001500
RefSNP(rs#)	rs8177464
Submitted Batch ID	ASNA1-YRI-021307
Submitted Date	Mar 02, 2007
Publication Cited	[1] NIEHS Envirommental Genome Project (EGP) - (N01 ES-15478)
First entry to dbSNP	Nov 9 2006 12:00:00:000AM

Resource Links
GenBank Accession	AY304483
Submitted Gene Name	ASNA1
Submitted Gene ID	439
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	GENOMIC
Method	METHOD-GENO-ILLUMINA
Ascertainment Samplesize	120
Population	YRI_GENO_PANEL

Allele
Observed Allele	A/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable
Homozygote Detected	Y

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 6
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TGATGGACAT AAAGTTGAGC CTATGGAGTC AGGCCAAGGA GGACCGGGAA TCTAACTTCA
 CCGAAAGGGC ATGGACTGGG TGTTTGGCTG GTTGCTAAGG
 W
 GAGGTTGGCG CTACCGGAAC ATAAGAGTGA TTGGTGTAAG TAAGAAAAGA CATAGCCAAT
 GAAAGGAGAG CTGCAAGACC TAGGGCCCAA TCAGTGAAAG

Submitted Frequency for ss66862127

There is no frequency submission for ss66862127.

dbSNP summary of Genotypes for ss66862127

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AAM_GENO_PANEL	124	124	T=0.89516127	A=0.10483871	T/T=0.80645162 A/T=0.17741935 A/A=0.01612903	Pr(chiSq=0.186,df=1) =0.752	Genotype Freq.
YRI_GENO_PANEL	120	120	T=0.87500000	A=0.12500000	T/T=0.78333336 A/T=0.18333334 A/A=0.03333334	Pr(chiSq=1.573,df=1) =0.251	Genotype Freq.

Submitted individual genotype for ss66862127

There is no individual genotype data for ss66862127.

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