Submitted SNP(ss) Details: ss66863395

Submitted SNP(ss) Details: ss66863395

Submitter
Handle	EGP_SNPS
Submitter SNP ID	ASNA1_002212
RefSNP(rs#)	rs8177465
Submitted Batch ID	ASNA1-YRI-021307
Submitted Date	Mar 02, 2007
Publication Cited	[1] NIEHS Envirommental Genome Project (EGP) - (N01 ES-15478)
First entry to dbSNP	Nov 9 2006 12:00:00:000AM

Resource Links
GenBank Accession	AY304483
Submitted Gene Name	ASNA1
Submitted Gene ID	439
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	GENOMIC
Method	METHOD-GENO-ILLUMINA
Ascertainment Samplesize	120
Population	YRI_GENO_PANEL

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable
Homozygote Detected	Y

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 6
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GCGGGGGTCT TTGGGTTTCA CTCTCTGGAA GTTACCTGGA GCAAATGAGA AAGACCTCAA
 TGCAGCCCTA GCACCCTCTG AGTTGGACCA TCCGTGTTGG
 R
 GCTCAAGTGC CGAACCACAG TGAACTCAGC GCCCGGGGGA CGGGGAAGCA CTTAGATATC
 CCCATCAGCT GGACCGTACC TGAGTGAATC CAGAGTTGTG

Submitted Frequency for ss66863395

There is no frequency submission for ss66863395.

dbSNP summary of Genotypes for ss66863395

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AAM_GENO_PANEL	122	122	G=0.86065573	A=0.13934426	G/G=0.72131145 A/G=0.27868852	Pr(chiSq=0.415,df=1) =0.527	Genotype Freq.
YRI_GENO_PANEL	120	120	G=0.80000001	A=0.20000000	G/G=0.61666667 A/G=0.36666667 A/A=0.01666667	Pr(chiSq=1.276,df=1) =0.273	Genotype Freq.

Submitted individual genotype for ss66863395

There is no individual genotype data for ss66863395.

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