Submitted SNP(ss) Details: ss66863396

Submitted SNP(ss) Details: ss66863396

Submitter
Handle	EGP_SNPS
Submitter SNP ID	ASNA1_003095
RefSNP(rs#)	rs8177470
Submitted Batch ID	ASNA1-YRI-021307
Submitted Date	Mar 02, 2007
Publication Cited	[1] NIEHS Envirommental Genome Project (EGP) - (N01 ES-15478)
First entry to dbSNP	Nov 9 2006 12:00:00:000AM

Resource Links
GenBank Accession	AY304483
Submitted Gene Name	ASNA1
Submitted Gene ID	439
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	GENOMIC
Method	METHOD-GENO-ILLUMINA
Ascertainment Samplesize	120
Population	YRI_GENO_PANEL

Allele
Observed Allele	G/C
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable
Homozygote Detected	Y

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 6
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 GCTATGGTGA GTGGAACAGG GCTTAGCCCC CACTTCTGGG AAAAGCCTCT TCCAGCCTTT
 CTTGTGCGCA CACACCAGCA GCCACCGTGT CCTATCCACT
 S
 TATATCCTGT GTCTCTCGTG TTTCACTCCT TCCTCAACAT ACTCACAAGG GAACCAATGA
 GGAATTGCAG AGCAGGAAGC ACACCAGAGT GCCTGAAGCT

Submitted Frequency for ss66863396

There is no frequency submission for ss66863396.

dbSNP summary of Genotypes for ss66863396

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AAM_GENO_PANEL	124	124	C=0.94354838	G=0.05645161	C/C=0.88709676 C/G=0.11290322	Pr(chiSq=0.024,df=1) =1.000	Genotype Freq.
YRI_GENO_PANEL	120	120	C=0.93333334	G=0.06666667	C/C=0.88333333 C/G=0.10000000 G/G=0.01666667	Pr(chiSq=2.315,df=1) =0.150	Genotype Freq.

Submitted individual genotype for ss66863396

There is no individual genotype data for ss66863396.

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