NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss105975397           
Submitter
HandleBGI
Submitter SNP IDBGI_rs1040858
RefSNP(rs#)rs1040858
Submitted Batch IDYanhuang1_20080807_d
Submitted DateSep 12, 2008
Publication CitedN.D.
First entry to dbSNPSep 12 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBGI-SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss105975397|allelePos=101|len=201|taxid=9606|alleles='C/T'|mol=Genomic
 TTAACATTAA CACACTAACC CCCTCCTCAA AATTAAAACG TGGATTGATC CAGAAGAGGT
 ATACCAAACA CTGAAAGGCA TCACGGGTAC ACCAAGGAAA
 Y
 AGGGAGAAAT CAGAGAGAAC AGAACACATT GAGCATTTCC AAAATGTCAA ATAATGGCAA
 CTGATTTCAG AAGCAGATTT TTTAAGTTTG CAGTTATTCA

  Submitted Frequency for ss105975397 back to top
There is no frequency submission for ss105975397.


  dbSNP summary of Genotypes for ss105975397 back to top
No sufficient data to compute Hardy-weinberg probability for ss105975397.


  Submitted individual genotype for ss105975397 back to top
There is no individual genotype data for ss105975397.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement