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Submitted SNP(ss) Details: ss109699858           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_1435660_chr6_2898444
RefSNP(rs#)rs3818276
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:93

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109699858|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 CAGGCGCTGC TCCTGTCACG GCCCCTTACT CGCCTTGCTG ACTTTAAACA GTCTCTCCTC
 GGTGTTCTCC TTGTCAAACT GTTCATCCCA GTTTCCTCTG AAATAGACAG CATTCACCAG
 AACCAGCCTT GTCAATGGAT CCACTGAGCC CGGAGAGAGC AACTCCGCAA TTTTACCTGA
 GCGGAAGAAT TCAAGACCGC
 R
 TTAGATAGGG GCGGCTGCGG ATCCCCGACA CATCAGGAAT CGGCTGGGGC CTTCTCCTTC
 AGCAGTCAAG TGCACGGATA GAGAGTTCCA CTGTCCCCCA AATATAAAGG GATACGTGTC
 CTTAAAGCAA AACAACAAAA TCTTCTGGTA CGAAAAACAT CATCAATTGA ATAAAACACA
 CAAAGTGAAC AAATATGCGT

  Submitted Frequency for ss109699858 back to top
There is no frequency submission for ss109699858.


  dbSNP summary of Genotypes for ss109699858 back to top
No sufficient data to compute Hardy-weinberg probability for ss109699858.


  Submitted individual genotype for ss109699858 back to top
There is no individual genotype data for ss109699858.

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