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Submitted SNP(ss) Details: ss119054029           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000155548_NCBI36.1_chr1_159460307
RefSNP(rs#)rs5082
Submitted Batch IDILLUMINA_WTSI:NA18507_c1
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss119054029|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 GGAAGGGGCT ATATACCTGT CTGTTTACCC ACCCCCTGTC AGGTGACAGG GACTATGGAT
 GGGCCCAGTG GGGCAGGGAT TATGTGAGGA TAAACAAGTT GGAGAAATGG GGGAGGAGAG
 GACAAGCACA TGGAAGACTC ATGGTGATGG GGTGAGAGGC AGGGGGTACA GCTCTTAGTG
 GAGGCTAAGG GGGTACACTT CAGGTATATT TGAGGTTCAT TCTTTTGAGA TCTGAGGTCC
 TTGGACTTGA
 R
 TGCAACAGGA AGCAGGATTC CAAGTTATTT CTCTGGAAAG CTCTGACATA TCAACCCATG
 GAATACCATC AACCCATCAT ACCATGGAAA GCTCATGGTG TCTTTATTCC ATTATGGGTA
 GATCTCATCT CTCAACCTTA TCCCACTTTA CTGCAACTTG GCAGAGAGAT ATTGGGGAGC
 AGAAGAAAGG AGAAAGGAAT TGAAATCAGG GACAGGGTTG AGGGCTATGG GGGTTAGGGG
 AATGAGGGTC

  Submitted Frequency for ss119054029 back to top
There is no frequency submission for ss119054029.


  dbSNP summary of Genotypes for ss119054029 back to top
No sufficient data to compute Hardy-weinberg probability for ss119054029.


  Submitted individual genotype for ss119054029 back to top
There is no individual genotype data for ss119054029.

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