NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1374570449           
Submitter
Handle1000GENOMES
Submitter SNP IDPHASE3_V1_29246359
RefSNP(rs#)rs148405512
Submitted Batch IDPhase3_V1
Submitted DateAug 16, 2014
Publication CitedN.D.
First entry to dbSNPAug 16 2014 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSEQ
Ascertainment Samplesize5008
PopulationN.D.
Allele
Observed Allele-/TG
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 5
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1374570449|allelePos=26|len=51|taxid=9606|alleles='-/TG'|mol=Genomic
 TCTCTTCTCT CTCTCTCTCT CTCTC
 N
 TGTGTGTGTG TGTGTGTGTG TGTGT

  Submitted Frequency for ss1374570449 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
SAS978-=0.74739999
TG=0.25260001
Phase3_V1-SAS1000GENOMES
AMR694-=0.75070000
TG=0.24930000
Phase3_V1-AMR1000GENOMES
AFR1322-=0.89859998
TG=0.10140000
Phase3_V1-AFR1000GENOMES
EUR1006-=0.77530003
TG=0.22470000
Phase3_V1-EUR1000GENOMES
EAS1008-=0.84520000
TG=0.15480000
Phase3_V1-EAS1000GENOMES


  dbSNP summary of Genotypes for ss1374570449 back to top
No sufficient data to compute Hardy-weinberg probability for ss1374570449.


  Submitted individual genotype for ss1374570449 back to top
There is no individual genotype data for ss1374570449.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement