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Submitted SNP(ss) Details: ss161966100           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr6_2900279
RefSNP(rs#)rs1964863
Submitted Batch IDNA07022_snpassay_chr6
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss161966100|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCTATAATTT TATGATTGAC ATACATAATT TACAAATAAA TATGAGGACT TAACCTAAAC
 TACAACTTCC TAGCTTTAGC TATATTTAAT CCTAGCTTAA AAACTAAGTC AAGGTCAGGT
 ACTGTGGCTT ACACTTGTAA TCCCAGCACT TTGGGGGGCC GAGGCGGGTG GATCGTGTGA
 GCTCAGGAGT TCGAGACCAG CCTGGCCAAC ATGGCGAAAG CCCGTCTCTA CTAAAAATAC
 AAAAATTAGC
 Y
 ATGTATGGTG GCATGCACCT GTAATCCCAG CTACTTGGGA GGCTGAGGCA GGAGAATCAC
 TTGAACCCAG AAGGCGGAGG TTGCAGTAAG CCGAGATCAG GCCACCACAC TCCAGCCTGG
 GCGACAGAGC GAGATTCTGT CTCAAAAAAA AAAAAACAAA AAAAAAAAAG CAAAAAACAC
 TAAGTTGAAT CAGTCTCTGA ATATCAAACG AACTTCACCA ACTGCTGGAT CCTTTAAGGG
 AGCAGCCATG

  Submitted Frequency for ss161966100 back to top
There is no frequency submission for ss161966100.


  dbSNP summary of Genotypes for ss161966100 back to top
No sufficient data to compute Hardy-weinberg probability for ss161966100.


  Submitted individual genotype for ss161966100 back to top
There is no individual genotype data for ss161966100.

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