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Submitted SNP(ss) Details: ss19235310           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuDD-200402.chr12.NT_029419.10_14876474
RefSNP(rs#)rs978379
Submitted Batch IDCSHL-HuDD-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUDD-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuDD21b19000141884900.R -333 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19235310|allelePos=501|len=701|taxid=9606|alleles='A/T'|mol=Genomic
 GTGGAGACTC CTCATCGCTG TATCTCTCTG ACCATGCCCA TACTCACTCC CTCACTCTCA
 CTGCAAAAAC CACACCAGCC TCCTTGCTCT TGGTGGGAAC ACCAGGCCTG TTTGTTCCCA
 CTGTGGGTCT TTGCACAAGC TCTTTCCTCG GCACATGTGG CTTGCCCTTA CCCCCTTAAA
 ACCTTTGTCC AAATGTCCCC TTCTCAGTGG AGCTTACAAT AACCACAGCC AAAATTGTAC
 CCACTCTTTC TTCCAGCTCT CCTGATTTCC CTTAGCCGGT TTCTTTCTTC TTTCTGTAAC
 ACTTATCGCC ATCCAACATA TAATTTATTT ATCTAAGTTT ACAATTTGTC TCTCCCACTG
 TAATGTGAAC CCACAAAAAT ATGTGTTTTT GTCTATTTTA TTTACTGGTA TATTCCCAGT
 TTATCTAAAG GTGCCTGGCA TATAGTGGGT GCTCAGTAAA TGCTGGTTGA CTGAAAGAAA
 CAAATAGAGA CCAGCACGAG
 W
 CAGGCCCCTC CAGAGCATCA GCTTTGAACT CTGGTTTCTA TTTTGCTTCC CTTGTTTAGT
 GTGTCCACCA TGGAGGAACC CTCTCACCTT CAGACACACT CAACTCTTCC CCATGGGTTA
 GGGTTAGTGT GGGAGTTGTC CTTCTGTGGC CAGCAAGTGG TGAGGGTGCC TCCCCAGGCC
 TCCTCTGTTG TCTTGGTTCC

  Submitted Frequency for ss19235310 back to top
There is no frequency submission for ss19235310.


  dbSNP summary of Genotypes for ss19235310 back to top
No sufficient data to compute Hardy-weinberg probability for ss19235310.


  Submitted individual genotype for ss19235310 back to top
There is no individual genotype data for ss19235310.

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