NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss193498873           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr19-12301739-12301740
RefSNP(rs#)rs113676690
Submitted Batch IDBUSHMAN8
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss193498873|allelePos=201|len=401|taxid=9606|alleles='-/T'|mol=Genomic
 AAGTAATATG AATAGGTCTA TATCTATTGA ATAAATTGAA TCAATAAATG ATAAATATCC
 CAAGAAAAAG GAACAGACCA GGATGATTTC ACTGGTGATT TATGGCAAAT ACTTATGGAA
 GAAATGATCC CAATTCTCTA CAATATCTTC CAGAAAACAG AAGTAGGTAG GTAGGTAATA
 CTTTCTTTTC TTTTCTTTTC
 N
 TTTTTTTTTT TGAGACGGAG TTTTGCTCTT GTTGCCCAGG CTGGAGTGCA ATGGCACCAT
 CTTGGCTCAC TGCAACCTCT GCCTCCCAGG TTCAAGCAAT TCTCCTGCCT CAGCCTCCCG
 AATAGCTGGG ATTACAGGCG CCTGTCACTA AGCCCAGCCA ATTTTTGTAT TCTTAGTAGA
 GACGGGCTTC CCCATGTTGG

  Submitted Frequency for ss193498873 back to top
There is no frequency submission for ss193498873.


  dbSNP summary of Genotypes for ss193498873 back to top
No sufficient data to compute Hardy-weinberg probability for ss193498873.


  Submitted individual genotype for ss193498873 back to top
There is no individual genotype data for ss193498873.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement