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Submitted SNP(ss) Details: ss1998377543           
Submitter
HandleACHAKRAVARTILAB
Submitter SNP IDSNV:chr17:42338945T>C
RefSNP(rs#)rs5036
Submitted Batch IDARIC exome sequencing
Submitted DateMay 20, 2016
Publication CitedN.D.
First entry to dbSNPMay 20 2016 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNIMBLEGEN EXOME CAPTURE - ILLUMINA SEQUENCING
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1998377543|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 ACGGAGGAGG CTGGGGTCCT CACCT
 Y
 GTGGGTACCC GGGTGTGATG TGGTG

  Submitted Frequency for ss1998377543 back to top
There is no frequency submission for ss1998377543.


  dbSNP summary of Genotypes for ss1998377543 back to top
No sufficient data to compute Hardy-weinberg probability for ss1998377543.


  Submitted individual genotype for ss1998377543 back to top
There is no individual genotype data for ss1998377543.

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