Submitted SNP(ss) Details: ss23187204

Submitted SNP(ss) Details: ss23187204

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd1192831
RefSNP(rs#)	rs708748
Submitted Batch ID	AFD_AFR_18-MAY-2004
Submitted Date	Aug 20, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000001.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	46
Population	AFD_AFR_PANEL

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 ACCTCAAAGA AACACCTCAA ATCAACAACC AGTGACTTTG CCATGCCGAG AGGGCATGAG
 AGAACTGCCC CTTTGCCTTG GCTGCTCT
 GAGAGGTCAT GT
 R
 GGTTGAACGT GC
 AAGTGGAATC CTTCCAGGAA TTGCCCTGTG GCCTGACTCA GAAGGGAAAA AAGTAAACAT
 TACCATCTTA GGCCCAAATA GCTGGGGT

Submitted Frequency for ss23187204

There is no frequency submission for ss23187204.

dbSNP summary of Genotypes for ss23187204

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_AFR_PANEL - NORTH AMERICA	46	46	G=0.80434781	A=0.19565217	G/G=0.69565219 A/G=0.21739130 A/A=0.08695652	Pr(chiSq=2.200,df=1) =0.150	Genotype Freq.

Submitted individual genotype for ss23187204

There is no individual genotype data for ss23187204.

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