Submitted SNP(ss) Details: ss24006256

Submitted SNP(ss) Details: ss24006256

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd2080676
RefSNP(rs#)	rs1849710
Submitted Batch ID	AFD_CHN_18-MAY-2004
Submitted Date	Aug 20, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000012.6
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_CHN_PANEL

Allele
Observed Allele	C/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 CCCATGTGAA TTTTACAGAC ACTGGGCTAA AAAGGGTATT CAGACACATG GACACACATT
 CCTAGAATGT CATCATATGG TCCTAATT
 CCATGTCACC AA
 S
 AACACAGACA AG
 ACCCTGTTTA CAACTTTTTC TTTCCTTTTT TTTAATTTTA GACCTTTCTG AGAAGATTAT
 TATATATGAC ATATCTATAG CTATGTGT

Submitted Frequency for ss24006256

There is no frequency submission for ss24006256.

dbSNP summary of Genotypes for ss24006256

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	C=0.95833331	G=0.04166667	C/C=0.91666669 C/G=0.08333334	Pr(chiSq=0.004,df=1) =1.000	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	46	46	C=0.89130437	G=0.10869565	C/C=0.78260869 C/G=0.21739130	Pr(chiSq=0.070,df=1) =1.000	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	C=0.72916669	G=0.27083334	C/G=0.54166669 C/C=0.45833334	Pr(chiSq=1.551,df=1) =0.251	Genotype Freq.

Submitted individual genotype for ss24006256

There is no individual genotype data for ss24006256.

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