Submitted SNP(ss) Details: ss24555810

Submitted SNP(ss) Details: ss24555810

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd1657950
RefSNP(rs#)	rs6256
Submitted Batch ID	AFD_EUR_18-MAY-2004
Submitted Date	Aug 21, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000011.5
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_EUR_PANEL

Allele
Observed Allele	G/T
Ancestral Allele	N.D.
Allele Origin	T:Germline C:Germline
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 CACTGGGATT TAGCTTTAGT TAATACATTC ACATCAGCTT TGTCTGCCTC TCCAAGACTT
 TTTTCATGGC TCTCAACCAA GACATTGT
 CTTCCTTTTT TC
 K
 GGGCCTCTGG GA
 ACCAGCATCT CTGGGAGCTA GAGGAGCTCC AAGGGCAACA AAATTGTGCA CATCCTGCAG
 CTTCTTACGC AGCCATTCTA CTCTCTCC

Submitted Frequency for ss24555810

There is no frequency submission for ss24555810.

dbSNP summary of Genotypes for ss24555810

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	48	48	G=0.83333331	T=0.16666667	G/G=0.66666669 G/T=0.33333334	Pr(chiSq=0.293,df=1) =0.655	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	46	46	G=0.91304350	T=0.08695652	G/G=0.82608694 G/T=0.17391305	Pr(chiSq=0.035,df=1) =1.000	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	G=0.91666669	T=0.08333334	G/G=0.83333331 G/T=0.16666667	Pr(chiSq=0.032,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss24555810

There is no individual genotype data for ss24555810.

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